Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag0462 ATGGGAGAATCACAAGACAACAAGACCCCTACCCTCGCTCCTGCCCTTCTAAATTATATCTTAGAAACAAGCGCATATCCGCAAGAGCACGAACAACTGAAGGAACTAAGAGCAGCCACGGTCGATAAGTACAAGTCTATGAGTATAGTGAGTGTACCTGTTGATGAAGCACAGCTCCTCTCAATGCTTCTTAAGCTCATCAATGCCAAGAACACTATTGAAATCGGCGTCTTTACGGGTTATTCTCTTCTCGCCACTGCACTTGCTCTACCACCTGATGGCCAGATTGTAGCGGTAGATCCGAACGAGGAAGCATTTACAACTGGGTTACCATTTTTTAAGAAAGCAGAAGTTGAACATAAGATCAATTACATTGCATCCGATGGCTCCCTCGCCCTCAAAAACTTGATCGAGGAAGGAAAAGAAGGAGAAGAAGAAGGAAGGTTTGATTTTGCTTTTGTGGATGCTAATAAAGAAGGGTACATGGAATATCATGAGCTGCTTATGAAACTGGTTAAGGTGGGTGGTATCATTGCCTATGACAACACCTTGTGGCTTGGATCTGTGTCAGTGTCTACGGATGAGGAAATGGAGGAATTTGTAAGCAAACACATAGAAACCAGGAATGAGGTGGTGAAGGAAATTCTAAAGAAAGGAAGGAAAGCTCTAAGGATATTCAATTCATTCCTAACAAAAGATTCTCGTATCGAGTCCGTTCTAACGTCCATAGGCGACGGACTCACTATATGTAGGCGTGTCAAGTAA 765 43.14 MGESQDNKTPTLAPALLNYILETSAYPQEHEQLKELRAATVDKYKSMSIVSVPVDEAQLLSMLLKLINAKNTIEIGVFTGYSLLATALALPPDGQIVAVDPNEEAFTTGLPFFKKAEVEHKINYIASDGSLALKNLIEEGKEGEEEGRFDFAFVDANKEGYMEYHELLMKLVKVGGIIAYDNTLWLGSVSVSTDEEMEEFVSKHIETRNEVVKEILKKGRKALRIFNSFLTKDSRIESVLTSIGDGLTICRRVK 254
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 5048778 5050115 - Conep13aG0048300.1 Cone13ag0462 450849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag0462 254 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 9 253 IPR002935 GO:0008171(InterPro)
Cone13ag0462 254 Pfam O-methyltransferase 22 253 IPR002935 GO:0008171(InterPro)
Cone13ag0462 254 PANTHER O-METHYLTRANSFERASE-RELATED 6 253 IPR050362 GO:0008757(PANTHER)
Cone13ag0462 254 ProSitePatterns EF-hand calcium-binding domain. 155 167 IPR018247 -
Cone13ag0462 254 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 15 252 IPR029063 -
Cone13ag0462 254 CDD AdoMet_MTases 73 180 - -
Cone13ag0462 254 Gene3D Vaccinia Virus protein VP39 3 254 IPR029063 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0462 Cone-Chr13:5048778 Cone7ag1143 Cone-Chr7:8595412 6.94E-67 dispersed
Cone13ag0462 Cone-Chr13:5048778 Cone19ag0420 Cone-Chr19:3480860 2.09E-119 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag0462 K00588 - vvi:100250567 278.87