Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone13ag0468 | ATGGCTACGTACTTTCATGGCAACACGGAAATCCAAGCACCCGATGGCTTGCAAACCCTTCTGCTCATGAACCCAACAGCCTATGTCCAATACTCCGACACCCCGCCACCACCGCCGCCGCCGACATCAGCCAACCACCTCGTATTCCTCAACTCCGCCGCCAACTCTCTCTCCACCCACAACCACCTCCCCCCTCACCACGCGCCAATATCATCCCACACACAACAATTCGTCGGCATCCCACTGCCCACAAGCGCTGCCGCTAACCACCATGACTTACCAAACATAACCTCCATGCATGGTTTCATCAATCCAGGTCACCTCCAGTACAACCTTTGGAACCCAAACATAAATAATGACCCATCTACGGTGGCGCGTGACTCCCCACGCGCCCAGCAAGGTTTGTCCTTGAGCCTCTCCTCCTCTCAACACCCTCCTCCTCCTCCAGGTTACGGCTCGAACCACGACGAACGGAAAGGCCCATTCACACAAAATGCCCAACAAATGATTTCAAACGATCACGACATGCGGAATATTTCGGGCGGGTCTTCCTCTTCGGCATCAGGTATAACCAACGGTGTTTCGGGTTTACAGGGCGTGCTGTTGAGTTCAAAGTACTTGAAAGCGGCTCAAGACCTTCTTGACGAGGTTGTCAATGTTGGAAATGATCACAATGGTATCAAGAAGGGTAGCAATATCGGACAACAGAGTAAGGTGGCCGGAGAGGGGTCTGGTCAGGTGGCTGGAGATGGGTCTGCCGGCGTGCGTGCAGATGGTAAGAGCAGCTCCGAGCTTTCCACCGCTGAGCGCCAAGAAATTCAAATGAAGAAGGCAAAGCTTATTAGCATGCTTGATGAGGTGGAGCAAAGGTACAGGCAATACCATCACCAAATGCAGATCATAATATCATCATTCGAGCAAGCGGCCGGGATTGGTTCTGCAAAAACATACACGTCTCTTGCGCTTGAGACGATCTCAAAGCAATTCAGGTGTTTGAAAGAGACTATTACCAGCCAAATCAAAAGTGCAAACAAAACCTTAGGAGAAGAAGATAATGGTCTTAGTAATGGTGGAGGAAAGATTGTAGGGTCGCGATTGAAATATGTCGATCATCAGCTTCGTCAGCAAAGAGCTCTTCACCAGTTGGGAATGATCCAGCATAATGCTTGGAGACCCCAAAGAGGATTGCCTGAAAGATCTGTTTCGGTTCTTCGTGCTTGGCTTTTCGAACACTTCCTTCACCCATATCCAAAAGATTCAGACAAGATCATGCTTGCAAAACAAACAGGGCTTACTAGAAGCCAGGTTTCAAATTGGTTTATAAATGCAAGAGTTAGGCTATGGAAACCAATGGTGGAAGAAATGTACTTGGAAGAAATCAAGGAACAAGAACAGAGTAATACTAATAATGGTGCAGTAGTGAAGAGCAACAATAATAACATCAACAATGAATGTTCTCCTTCCAAATCCATCACTTTACAAGGCAAAAGTAGTACTCCTCCAACTCATGATCATCAAAACCAACCATCAGGCTTCAACTCCAAGAAAGAGAATCCCCCCGAAATCTTAACTTCGCCGGTAAATCTTCGGAACCAATCCAGTTTTTCTCTCATTGGGTCTTCGGAACTAGAAGGGATCACTCAATTGAGCCCGAAGAAGCAAAGAACATCGGATCATGTGGAAGCTAGTAATGAGCATAACATGTCAATGAAGTTCAATGAAGATCATAGACAAAGTAGTAGAGATGGGTATCCCTTTATGGGAGGCCAAACCAACTTTATTGGAGGTTTTGGGCAATACCCAATTGGGGAAATAGACACTAGGTTCGATGGAGATGATCAATTCACACCCAGGTTTACGGGCAATAACGGCGTTTCCCTCACTCTCGGACTTCCTCACTGTGAAAACCTGTCGCTATCTGGGGCCCACCAGGGCTTTCTCCATAACCAAAACATTAGGATTAATGGAACTCGAAGAGTAGTCGACCACATTGGGGAACAAGACGAGTTTAGTGCTATGAATGGTACTAATGGATCATCTGTGTCCCATTCTTCTACTGCATTTGAAAACATCAATATTCAGAACCGAAAGCGATTCGCCGCCCAATTGTTGCACGACTTTGTGGCTTGA | 2130 | 46.95 | MATYFHGNTEIQAPDGLQTLLLMNPTAYVQYSDTPPPPPPPTSANHLVFLNSAANSLSTHNHLPPHHAPISSHTQQFVGIPLPTSAAANHHDLPNITSMHGFINPGHLQYNLWNPNINNDPSTVARDSPRAQQGLSLSLSSSQHPPPPPGYGSNHDERKGPFTQNAQQMISNDHDMRNISGGSSSSASGITNGVSGLQGVLLSSKYLKAAQDLLDEVVNVGNDHNGIKKGSNIGQQSKVAGEGSGQVAGDGSAGVRADGKSSSELSTAERQEIQMKKAKLISMLDEVEQRYRQYHHQMQIIISSFEQAAGIGSAKTYTSLALETISKQFRCLKETITSQIKSANKTLGEEDNGLSNGGGKIVGSRLKYVDHQLRQQRALHQLGMIQHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKIMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYLEEIKEQEQSNTNNGAVVKSNNNNINNECSPSKSITLQGKSSTPPTHDHQNQPSGFNSKKENPPEILTSPVNLRNQSSFSLIGSSELEGITQLSPKKQRTSDHVEASNEHNMSMKFNEDHRQSSRDGYPFMGGQTNFIGGFGQYPIGEIDTRFDGDDQFTPRFTGNNGVSLTLGLPHCENLSLSGAHQGFLHNQNIRINGTRRVVDHIGEQDEFSAMNGTNGSSVSHSSTAFENINIQNRKRFAAQLLHDFVA | 709 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 5121282 | 5125744 | + | Conep13aG0048900.1 | Cone13ag0468 | 450855 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone13ag0468 | 709 | Pfam | Homeobox KN domain | 407 | 446 | IPR008422 | GO:0003677(InterPro)|GO:0006355(InterPro) | |
Cone13ag0468 | 709 | FunFam | BEL1-like homeodomain protein 9 | 393 | 455 | - | - | |
Cone13ag0468 | 709 | Gene3D | - | 386 | 464 | - | - | |
Cone13ag0468 | 709 | SMART | HOX_1 | 390 | 454 | IPR001356 | GO:0003677(InterPro) | |
Cone13ag0468 | 709 | MobiDBLite | consensus disorder prediction | 225 | 242 | - | - | |
Cone13ag0468 | 709 | Coils | Coil | 270 | 290 | - | - | |
Cone13ag0468 | 709 | SMART | prehox3 | 195 | 338 | IPR006563 | - | |
Cone13ag0468 | 709 | MobiDBLite | consensus disorder prediction | 224 | 269 | - | - | |
Cone13ag0468 | 709 | MobiDBLite | consensus disorder prediction | 119 | 161 | - | - | |
Cone13ag0468 | 709 | Pfam | Associated with HOX | 200 | 337 | IPR006563 | - | |
Cone13ag0468 | 709 | MobiDBLite | consensus disorder prediction | 462 | 529 | - | - | |
Cone13ag0468 | 709 | MobiDBLite | consensus disorder prediction | 119 | 141 | - | - | |
Cone13ag0468 | 709 | ProSiteProfiles | 'Homeobox' domain profile. | 387 | 450 | IPR001356 | GO:0003677(InterPro) | |
Cone13ag0468 | 709 | SUPERFAMILY | Homeodomain-like | 391 | 456 | IPR009057 | - | |
Cone13ag0468 | 709 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 143 | 488 | IPR050224 | GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0006357(PANTHER) | |
Cone13ag0468 | 709 | CDD | homeodomain | 390 | 451 | IPR001356 | GO:0003677(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone13ag0468 | Cone-Chr13:5121282 | Cone8ag1218 | Cone-Chr8:10314758 | 3.94E-87 | dispersed | |
Cone10ag0125 | Cone-Chr10:633452 | Cone13ag0468 | Cone-Chr13:5121282 | 1.38E-196 | wgd | |
Cone13ag0468 | Cone-Chr13:5121282 | Cone19ag0426 | Cone-Chr19:3526526 | 0 | wgd | |
Cone13ag0468 | Cone-Chr13:5121282 | Cone3ag0138 | Cone-Chr3:763964 | 2.54E-216 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
44604 | PF00096 | zf-C2H2 | 0.0044 | CL0361 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone13ag0468 | - | - | - | 0.0 |