Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone13ag0475 | ATGAACGACTTATTTTCCTCCGGCTCTTTCACTCGCGACAGGTACTCGATCGAGATGACGAACACGGAGTCTCCGACGGCCGTCAACCTCGACAAGTTCTTCGGGGATGTGGAGTCGGTCAAGGACGAGTTGAAGGAGCTGGAGCGGCTCTATCTCAGCCTCCACAATTCGCATGAGCAGAGCAAGACGCTACACAATGCTAAGGCTGTTAAGGATCTCCGATCTCGCATGGATTCTGATGTTTCTCTTGCTTTAAAGAAGGCGAAGCTGGTCAAGGTCCGATTGGAAGCTCTTGATCGCTCTAATGCTGCGAATCGGAGCTTACCTGGTTGTGGACCTGGCTCTTCGTCGGACCGGACTAGGACTTCTGTAGTCAACGGGCTGAGGAAGAAGCTCAAGGAATCTATGGACAGCTTCAATATTCTCAGGCAGCAGATTTCGGCAGAGTACAGAGAGACCGTTCAGCGCCGTGTTTTCACCGTCACCGGTGAAAATCCCGATGAGAAGACAATCGATCTCATGATCTCTACAGGAGAAAGTGAGACATTCTTGCAAAAGGCGATCCAAGAGCAAGGCAGAGGCAGAGTTTTGGACACCATAAATGAGATTCAAGAGAGGCATGATGCTGTCAAAGAGATGGAAAAAAACCTACAGGACTTGCACCAAGTATTCTTGGACATGGCAGTTTTGGTGCAGGCTCAAGGCGAGCAACTAGACGACATAGAGAACCAGGTGTTGAGAGCCCATTCGTTTGTCAACAAAGGGACCCATCAGTTGCAGGAGGCTAGGGTACACCAGAAAAGTACCCGGAAATGGACTTGTTACGCCATCATTCTACTGCTGGTCATCATCCTCATAGTGATTCTTAGCTTGAAGCCATGGAACTGGTAA | 891 | 49.49 | MNDLFSSGSFTRDRYSIEMTNTESPTAVNLDKFFGDVESVKDELKELERLYLSLHNSHEQSKTLHNAKAVKDLRSRMDSDVSLALKKAKLVKVRLEALDRSNAANRSLPGCGPGSSSDRTRTSVVNGLRKKLKESMDSFNILRQQISAEYRETVQRRVFTVTGENPDEKTIDLMISTGESETFLQKAIQEQGRGRVLDTINEIQERHDAVKEMEKNLQDLHQVFLDMAVLVQAQGEQLDDIENQVLRAHSFVNKGTHQLQEARVHQKSTRKWTCYAIILLLVIILIVILSLKPWNW | 296 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 5185404 | 5187362 | + | Conep13aG0049600.1 | Cone13ag0475 | 450862 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone13ag0475 | 296 | MobiDBLite | consensus disorder prediction | 108 | 122 | - | - | |
Cone13ag0475 | 296 | Gene3D | - | 28 | 160 | - | - | |
Cone13ag0475 | 296 | FunFam | Qa-SNARE, Sso1/Syntaxin1-type, SYP12A-group | 27 | 157 | - | - | |
Cone13ag0475 | 296 | ProSitePatterns | Syntaxin / epimorphin family signature. | 206 | 246 | IPR006012 | GO:0005484(InterPro)|GO:0006886(InterPro)|GO:0016020(InterPro) | |
Cone13ag0475 | 296 | SMART | tSNARE_6 | 195 | 262 | IPR000727 | - | |
Cone13ag0475 | 296 | SMART | SynN_4 | 25 | 151 | IPR006011 | GO:0016020(InterPro) | |
Cone13ag0475 | 296 | FunFam | Syntaxin 132 | 193 | 292 | - | - | |
Cone13ag0475 | 296 | PANTHER | SYNTAXIN | 32 | 282 | IPR045242 | GO:0000149(PANTHER)|GO:0005484(PANTHER)|GO:0005886(PANTHER)|GO:0006886(PANTHER)|GO:0006887(PANTHER)|GO:0006906(PANTHER)|GO:0012505(PANTHER)|GO:0016021(PANTHER)|GO:0031201(PANTHER)|GO:0048278(PANTHER) | |
Cone13ag0475 | 296 | SUPERFAMILY | t-snare proteins | 29 | 255 | IPR010989 | GO:0016020(InterPro)|GO:0016192(InterPro) | |
Cone13ag0475 | 296 | Coils | Coil | 30 | 57 | - | - | |
Cone13ag0475 | 296 | CDD | SynN | 30 | 187 | IPR006011 | GO:0016020(InterPro) | |
Cone13ag0475 | 296 | Gene3D | - | 196 | 292 | - | - | |
Cone13ag0475 | 296 | Pfam | SNARE domain | 236 | 288 | IPR000727 | - | |
Cone13ag0475 | 296 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 200 | 262 | IPR000727 | - | |
Cone13ag0475 | 296 | MobiDBLite | consensus disorder prediction | 103 | 122 | - | - | |
Cone13ag0475 | 296 | CDD | SNARE_syntaxin1-like | 199 | 261 | - | - | |
Cone13ag0475 | 296 | Coils | Coil | 200 | 220 | - | - | |
Cone13ag0475 | 296 | Pfam | Syntaxin | 32 | 235 | IPR006011 | GO:0016020(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone13ag0475 | Cone-Chr13:5185404 | Cone1ag0131 | Cone-Chr1:738960 | 2.48E-107 | dispersed | |
Cone10ag0529 | Cone-Chr10:2441741 | Cone13ag0475 | Cone-Chr13:5185404 | 3.44E-75 | wgd | |
Cone13ag0475 | Cone-Chr13:5185404 | Cone19ag0431 | Cone-Chr19:3567171 | 2.02E-190 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone13ag0475 | K08486 | - | csv:101208931 | 457.603 |