Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone13ag0504 | ATGGCTTCTCGATTCTGGACCCAGGGTGGTAGTGATACTGAGGATGAGGAAAGTGAGTATGATGAGGAAATTGAGAATGGAGAACAAGATGATACCACAGCCACGGCCCAAGCTGCTGGAAGTAGATACCTTCTTGGAATTGATGCTGATAGTGATGATTCTGATGGCCAAAGGCGTGTTGTTAGATCAGCCAAAGACAAGCGCTTTGAGGAGATGTCTGCAACTGTTGACCAGATGAAAAATGCAATGAAGATTAATGATTGGGTCAGCTTGCAAGAGAGCTTTGATAAGATGAATAAGCAACTTGAGAAAGTCATGCGTGTGACCGAGTCTGAAAAGGTCCCTACTCTATATATCAAAGCACTTGTGATGTTGGAGGACTTCTTAACCCAGGCCTTGGCAAATAAGGAGGCAAAGAAGAAGATGAGTAGTAGTAATGCCAAGGCCTTGAATTCGATGAAACAGAAGCTTAAGAAGAACAATAAACAATATGAAGAGGCAATTAACAGGTTCCGGGAGAATCCAGAGAGTGAGGAGGAAAAGGATGAGGAGGAAGAGTCAGAGGAGGAAGAAGAGTCCGGTTCAGAGATTGAGGAGGACCCTTCCAAAATTGCAATGTCTGAGGATGAGGGAGAAGAAGAGGATGATCAAGATGATCGGGCTGGGGGTTGGGAGAAAATGATGAGCAAAAAAGATAAACTCATGGATAAGCAGTTTATGAAGGACCCAAGTGAGATCACATGGGATACTGTTAACAAGAAATTTAAAGAGGTTGTGGCTGCTCGAGGTAGGAAGGGAACAGGAAGGTTTGAGCAGGTTGAGCAGCTTACCTTCTTGACAAAAGTTGCCAAGACCCCTGCACAGAAGCTTGAGATCCTTTTTAGTGTCATTTCTTCTCAGTTTGATGTTAACCCAGGTCTTACTGGACACATGCCTATAAATGTGTGGAAAAAGTGTGTGCAAAACATGCTTGTGGTACTTGACATTCTTGTGCAGCATTCCAACATTGTGGTGGATGATATGGTTGAACCTGATGAGAATGAAAGCCAAAAAGGAGCTGACTATGATGGCAAAATTCATGTTTGGGGAAACCTGGTTGCTTTCTTGGAAAGAATAGATACAGAGTTTTTCAAGAGCTTGCAATGCATAGATCCACACACTCGTGAATATGTTGAAAGACTTAGAGATGAGCCAATGCTTTCAGTTCTTGCCCAAAATATCCAAGAATATTTTGAACAGGTTGGGGATTTCAAAGTGGCTTCCAAGGTCGCCTTGAGGCGGGTTGAACTTATCTACTACAAACCACAGGAGGTTTATGATGCAATGAGAAAGTTGGCTGAACAGACCGAAGATAGAGATAATGGAGAATCAGGGGAGGAGATTAAAGTGGTCGAGGAAAGTAGGGGTCCTTCTGCTTTTATTGTCATTCCTGAGATTGTGCCTCGAAAACCCACCTTCCCAGAGAGCAGTAGAGCCTTGATGGATATTCTGGTGACTCTCATATACGGGCATGGAGATGAGAGAACTAAGGCCCGAGCAATGCTTTGTGATATTTACCACCACGCCCTATTGGATGAGTTTTCTACTTCTCGTGATTTGCTGCTGATGAGCCACTTGCAAGACAGTATTCAACATATGGACATTTCAACCCAGATTCTATTCAACAGGGCTATGGCTCAGCTTGGTCTATGTGCATTCCGTCTTGGACTGGTAAATGAAGGACATGGCTGCCTTTCTGAATTGTATTCAGGCGGACGAATAAAGGAATTACTTGCACAAGGTGTCTCACAGAGCCGTTATCATGAGAAGACTCCAGAACAGGAAAGGCTTGAAAGAAGACGGCAAATGCCATACCATATGCACATAAATCTTGAGCTTCTTGAGGCTGTTCACTTGATCTGTGCTATGTTGCTTGAAGTTCCCAACGTGGCAGCTAACATCCATGATGCGAGGCGAAAGGTCATCAGCAAGACATTTAGGCGATTGCTCGAGGTGAGTGAGAGGCAAACGTACACAGGCCCACCCGAAAGCGTCCGGGACCACATAATGGCTGCCACCCGGGCACTCAACAAAGGAGATTTCCAAAAGGCTTATGATGTCATCATATCCCTTGATGTATGGAAGCTCCTTAGAAACCGTGATCACGTCCTTGAGATGCTAAAGGGTAAGATCAAGGAAGAGGCTTTGAGGACCTACCTGTTTACCTACTCTTCATCTTACAAGTCTCTCAGCTTGGACCAGCTCACCAAACTGTTTGACCTCGTTGAGACTCAGATCCAAAGCATTGTAAGCAAGATGATGATCAATGAAGAGCTCCATGCGAGCTGGGATCAGCCGAGCAGGTGCATTGTTTTTCATGATGTTGAGTACACTAGATTGCAGGCTCTGGCATTCCAGTTGACCGAGAAGTTGACTGTTCTAGCTGAGAGTAATGAAAGAGCCGTAGAGGCAAGGTTAGGTGGGGGAGGACTGGATCTGCCTATGAGGCGAAGAGACAACAACCAAGACTACATGGGAACAGGTGCCCCAAATAGGTGGCAAGACAACTTGTCTTTTGCTCAAGGAGGAAGGCAGGGTGGTGGAAGTAGAGGGAGATTATCAGGGTTGGGCCAAGGTTTAGGAGGTGGTGGATATTCAAGGGACCGAACAAGCCAGTCTAGAGGTGGCGGATCGGGTTACCAGAGTAACCGAAATCAGACAGGTTTGTCTGGAAGGGGGTCCCAAATGGACGGGTCTGGTCGGATGGTCAGTCTCAATAGAGGGGTTCGATCATAA | 2775 | 45.59 | MASRFWTQGGSDTEDEESEYDEEIENGEQDDTTATAQAAGSRYLLGIDADSDDSDGQRRVVRSAKDKRFEEMSATVDQMKNAMKINDWVSLQESFDKMNKQLEKVMRVTESEKVPTLYIKALVMLEDFLTQALANKEAKKKMSSSNAKALNSMKQKLKKNNKQYEEAINRFRENPESEEEKDEEEESEEEEESGSEIEEDPSKIAMSEDEGEEEDDQDDRAGGWEKMMSKKDKLMDKQFMKDPSEITWDTVNKKFKEVVAARGRKGTGRFEQVEQLTFLTKVAKTPAQKLEILFSVISSQFDVNPGLTGHMPINVWKKCVQNMLVVLDILVQHSNIVVDDMVEPDENESQKGADYDGKIHVWGNLVAFLERIDTEFFKSLQCIDPHTREYVERLRDEPMLSVLAQNIQEYFEQVGDFKVASKVALRRVELIYYKPQEVYDAMRKLAEQTEDRDNGESGEEIKVVEESRGPSAFIVIPEIVPRKPTFPESSRALMDILVTLIYGHGDERTKARAMLCDIYHHALLDEFSTSRDLLLMSHLQDSIQHMDISTQILFNRAMAQLGLCAFRLGLVNEGHGCLSELYSGGRIKELLAQGVSQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLICAMLLEVPNVAANIHDARRKVISKTFRRLLEVSERQTYTGPPESVRDHIMAATRALNKGDFQKAYDVIISLDVWKLLRNRDHVLEMLKGKIKEEALRTYLFTYSSSYKSLSLDQLTKLFDLVETQIQSIVSKMMINEELHASWDQPSRCIVFHDVEYTRLQALAFQLTEKLTVLAESNERAVEARLGGGGLDLPMRRRDNNQDYMGTGAPNRWQDNLSFAQGGRQGGGSRGRLSGLGQGLGGGGYSRDRTSQSRGGGSGYQSNRNQTGLSGRGSQMDGSGRMVSLNRGVRS | 924 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 5417701 | 5421564 | + | Conep13aG0052700.1 | Cone13ag0504 | 450891 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone13ag0504 | 924 | MobiDBLite | consensus disorder prediction | 140 | 223 | - | - | |
Cone13ag0504 | 924 | SMART | motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 | 719 | 807 | IPR000717 | - | |
Cone13ag0504 | 924 | MobiDBLite | consensus disorder prediction | 12 | 29 | - | - | |
Cone13ag0504 | 924 | MobiDBLite | consensus disorder prediction | 837 | 856 | - | - | |
Cone13ag0504 | 924 | Pfam | Eukaryotic translation initiation factor 3 subunit 8 N-terminus | 50 | 650 | IPR008905 | GO:0003743(InterPro)|GO:0005852(InterPro)|GO:0006413(InterPro)|GO:0031369(InterPro) | |
Cone13ag0504 | 924 | MobiDBLite | consensus disorder prediction | 205 | 219 | - | - | |
Cone13ag0504 | 924 | Hamap | Eukaryotic translation initiation factor 3 subunit C [EIF3C]. | 2 | 864 | IPR027516 | GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0005852(InterPro)|GO:0006413(InterPro)|GO:0031369(InterPro) | |
Cone13ag0504 | 924 | MobiDBLite | consensus disorder prediction | 820 | 924 | - | - | |
Cone13ag0504 | 924 | MobiDBLite | consensus disorder prediction | 878 | 914 | - | - | |
Cone13ag0504 | 924 | MobiDBLite | consensus disorder prediction | 158 | 177 | - | - | |
Cone13ag0504 | 924 | PANTHER | EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED | 1 | 892 | IPR027516 | GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0003743(PANTHER)|GO:0005852(InterPro)|GO:0005852(PANTHER)|GO:0006413(PANTHER)|GO:0006413(InterPro)|GO:0031369(InterPro)|GO:0031369(PANTHER) | |
Cone13ag0504 | 924 | MobiDBLite | consensus disorder prediction | 178 | 197 | - | - | |
Cone13ag0504 | 924 | Pfam | PCI domain | 715 | 787 | IPR000717 | - | |
Cone13ag0504 | 924 | SUPERFAMILY | Winged helix DNA-binding domain | 714 | 789 | IPR036390 | - | |
Cone13ag0504 | 924 | ProSiteProfiles | PCI domain profile. | 618 | 790 | IPR000717 | - | |
Cone13ag0504 | 924 | Coils | Coil | 147 | 174 | - | - | |
Cone13ag0504 | 924 | MobiDBLite | consensus disorder prediction | 140 | 157 | - | - | |
Cone13ag0504 | 924 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone13ag0504 | Cone-Chr13:5417701 | Cone19ag0456 | Cone-Chr19:3770923 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone13ag0504 | K03252 | - | vvi:100252123 | 1367.83 |