Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag0525 ATGTTGTCTCTTGATTGGATTATTAATTTTCTTTGGTCAGGTAATAAAATACTTGACAAGTTTTGCATTGATATATTGATCTATGTATTCTTGCAAAAGCGTTCCCTTCACTGTCGAATCATCCATTGTGGACAAGTACATTTTGAGACTCCTGATAATTTGACGTATGAAATTGGATTTTTCATTCTGCTTAAATTGCAGGCTGGAGGTCCATCTTGGAATGTACTATTAGGAAGAAGAGACAGTTTAACGGCTAATCAAGCCGGTGCCAACGCCTCCTTACCATCTCCATTCGAAGGCATTAACAACATCACTTCCAAATTCTCAGCAGTCGGATTAAACACCAATGACCTTGTCGCATTATCAGGCGCACATACATTTGGACGGGCTCAATGTCGACTGTTCAGCAACCGGCTCTACAATTTCAATAACACGGGCAACCCGGACCCGACCCTAAGCTCATCGCTCTTAGCCACTCTGCAACAAACATGTCCCCAAAATGGCAGCGGATTTGCTATAGCCAACCTCGATGCTAGTACTCCAGATAGTTTCGACAACAATTACTTTACAAACCTTCAAAACAATCAAGGCCTTCTTCAATCAGACCAAGAGCTATTTTCCACTAGCGGCGCGCCTACGGTACCTATTGTGAATAGCTTTGCAGGCAATCAAACTGCTTTCTTTGCAAGCTTTGTTCAGTCGATGATTAACATGGGAAATATTAGTCCTTTGACTGGAAGCAGTGGTGAAATTAGATTGGATTGTAAGAAGGTTAATGGAAGTTGA 786 41.6 MLSLDWIINFLWSGNKILDKFCIDILIYVFLQKRSLHCRIIHCGQVHFETPDNLTYEIGFFILLKLQAGGPSWNVLLGRRDSLTANQAGANASLPSPFEGINNITSKFSAVGLNTNDLVALSGAHTFGRAQCRLFSNRLYNFNNTGNPDPTLSSSLLATLQQTCPQNGSGFAIANLDASTPDSFDNNYFTNLQNNQGLLQSDQELFSTSGAPTVPIVNSFAGNQTAFFASFVQSMINMGNISPLTGSSGEIRLDCKKVNGS 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 5541151 5542015 - Conep13aG0054900.1 Cone13ag0525 450912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag0525 261 Gene3D - 67 259 - -
Cone13ag0525 261 PANTHER PEROXIDASE 72-RELATED 43 258 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone13ag0525 261 PRINTS Haem peroxidase superfamily signature 69 81 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone13ag0525 261 PRINTS Haem peroxidase superfamily signature 117 132 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone13ag0525 261 PRINTS Haem peroxidase superfamily signature 177 192 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone13ag0525 261 Gene3D Peroxidase, domain 2 95 238 - -
Cone13ag0525 261 ProSiteProfiles Plant heme peroxidase family profile. 52 259 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone13ag0525 261 FunFam Peroxidase 95 238 - -
Cone13ag0525 261 CDD secretory_peroxidase 68 258 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cone13ag0525 261 ProSitePatterns Peroxidases proximal heme-ligand signature. 117 127 IPR019793 -
Cone13ag0525 261 SUPERFAMILY Heme-dependent peroxidases 67 259 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone13ag0525 261 Pfam Peroxidase 67 222 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone13ag0525 261 PRINTS Plant peroxidase signature 191 208 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone13ag0525 261 PRINTS Plant peroxidase signature 69 84 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone13ag0525 261 PRINTS Plant peroxidase signature 116 128 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone13ag0525 261 PRINTS Plant peroxidase signature 175 190 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone13ag0525 261 PRINTS Plant peroxidase signature 233 246 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0525 Cone-Chr13:5541151 Cone12ag0780 Cone-Chr12:7133940 2.43E-52 dispersed
Cone1ag0415 Cone-Chr1:3631426 Cone13ag0525 Cone-Chr13:5541151 7.86E-61 wgd
Cone13ag0525 Cone-Chr13:5541151 Cone19ag0477 Cone-Chr19:3919418 3.20E-127 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag0525 K00430 - mdm:139190132 329.331