Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag0577 ATGGCTTTGTCTTCTTCTGATCCTGGTTTGAAACAAGAAATTGGTAGCAGTAGCGGTTGTGGCGGTGGAGGAGGAGGAAGAGAAGCTTCAGATGCTTTGATACCTAGCGATCAGCTTTTTCTGTACAGAGGGTTGAAGAAGGCGAAGAAAGACAGAGGCTGTACAGCCAAGGAGCGCATCAGCAAAATGCCACCCTGTGCTGCAGGGAAACGGAGCTCAATTTACCGTGGAGTTACCAGGCATAGATGGACCGGTCGTTATGAAGCTCATCTTTGGGATAAAAGCACCTGGAATCAGAACCAGAATAAAAAGGGAAAACAAGTTTACTTGGGTGCATATGATGAGGAGGAGGCCGCAGCTAGGGCATACGATCTTGCTGCTTTGAAATATTGGGGCCCTGGGACACTCATCAATTTTCCAATTACTGATTATGCGAGAGACCTTGAAGAGATGCAGAATCTATCACGAGAGGAGTACCTTGCATCATTAAGAAGAAAGAGCAGCGGGTTCTCAAGAGGAATCTCTAAATATCGTGGTCTATCTAGTAGATGGGATGCACCATTTGGTCGAATGACTGGAGCAGAGTACTTCAACAGCAACAATTATGGTACAGGAGACGATCCAACAGCAGAAAGTGATATCGTAAATAAATTCTGCATTGAAAGAAAGATCGACTTAACAAGTTGCATCAAGTGGTGGGGCCCAACCAAAACCCGTCAAGTAGATGGTAGCTCAAAATCATCAGAAGATGCCAAACATGGTAGCGCCACAGATTTTGCATCTGAAGTTAAGGCACTAGAGTGGGCAGTTAAGCACACAGATCCATATGAGATGCCTCAATTGGGCACTTACAATGAAGGAAAGAAGAAGCACAAAGGCTCCAAGGTCTCTGCCTTAAGCATATTGTCCCGCTCTGCTGCCTATAAGAGCTTGCAAGAGAAAGCATCGAAGAAACAAGAAGACAACAATGAAAATGATGAGAATGAAAACAAGAATACAATCAAGAAGATGGATTATGGGAAGGCAGTTGAGAAACCTACAAATCATGATCATGGATGTGATGAGAGATTTGGAGTTGGGTTAGGATCGAGCGGTGGGGGTTTGTCTCTTCAGAGAAATATGTTCCCATTGATTCCTTTCTTGTCGGCCCCACTTTTGACGAGCTACAACACTGTTGATCCATTGGTGGACCCCATTCTTTGGACATCTCTTGTTCCTGTTCTTCCTACCGAACTTTCCCGTGCAGCTGAGGTTACAAAGACCGAGACAACTCCAACTAATTACTCTTTGTTTCGCCCAGAGTGA 1305 44.83 MALSSSDPGLKQEIGSSSGCGGGGGGREASDALIPSDQLFLYRGLKKAKKDRGCTAKERISKMPPCAAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQVYLGAYDEEEAAARAYDLAALKYWGPGTLINFPITDYARDLEEMQNLSREEYLASLRRKSSGFSRGISKYRGLSSRWDAPFGRMTGAEYFNSNNYGTGDDPTAESDIVNKFCIERKIDLTSCIKWWGPTKTRQVDGSSKSSEDAKHGSATDFASEVKALEWAVKHTDPYEMPQLGTYNEGKKKHKGSKVSALSILSRSAAYKSLQEKASKKQEDNNENDENENKNTIKKMDYGKAVEKPTNHDHGCDERFGVGLGSSGGGLSLQRNMFPLIPFLSAPLLTSYNTVDPLVDPILWTSLVPVLPTELSRAAEVTKTETTPTNYSLFRPE 434
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 6005729 6008859 + Conep13aG0060100.1 Cone13ag0577 450964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag0577 434 FunFam AP2-like ethylene-responsive transcription factor 73 142 - -
Cone13ag0577 434 PRINTS Ethylene responsive element binding protein signature 122 142 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone13ag0577 434 PRINTS Ethylene responsive element binding protein signature 75 86 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone13ag0577 434 MobiDBLite consensus disorder prediction 1 31 - -
Cone13ag0577 434 Gene3D AP2/ERF domain 74 142 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone13ag0577 434 SUPERFAMILY DNA-binding domain 73 141 IPR016177 GO:0003677(InterPro)
Cone13ag0577 434 Pfam AP2 domain 75 132 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone13ag0577 434 MobiDBLite consensus disorder prediction 311 354 - -
Cone13ag0577 434 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 58 257 - -
Cone13ag0577 434 MobiDBLite consensus disorder prediction 237 256 - -
Cone13ag0577 434 Coils Coil 308 336 - -
Cone13ag0577 434 ProSiteProfiles AP2/ERF domain profile. 74 140 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone13ag0577 434 SMART rav1_2 74 146 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0577 Cone-Chr13:6005729 Cone18ag0626 Cone-Chr18:3211989 1.16E-57 dispersed
Cone13ag0577 Cone-Chr13:6005729 Cone19ag0534 Cone-Chr19:4366127 2.21E-272 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44613 None None None None Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag0577 K09285 - cit:102624476 624.78