Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone13ag0581 | ATGGAGAGGTTTCTGAAGGACTTTGAAATCGAGAACAAGCATTCTTCCGAGGAAGCTCGGAGAAGATGGAGATCCGCCGTCTCCATTGTCAAAAATCGAAGACGGAGGTTTCGTGACGTTCCAGATCTCGACAAACTCTCTGAGGCTGAGAAGAAGAAGACCAAAATCCGGGAAAAGTTTCGAGTGGCTCTTTATGTTCAAACAGCAGCATTTCACTTTGTCGATGCCGCTGGTCCTCCAGCTGAATACAACCTGTCAGAAGAAGCTAGAGAAGTGGGTTTTAATATTCACCCGGACGAACTTGCATCTATGGTCCGTAGTCATAATAAGGCCGGGTTGAAGGACCATGGTGGCGTTAACGGAATTGCAAGGAAAGTTTCTGTCTCGCTGAAGGAAGGTGTCAATGAGAAGGATATACCGAAACGACAACAGATTTATGGCTTGAACCGTTACACAGAAAAACCTGCCAGAAACTTTTGGGTGTTTGTATGGGATGCATTACAAGATTTAACACTAATCATCCTTATGGTTTGTGCACTAGTTTCTTTAGGTGTAGGAATTGCCACCGAAGGATGGCCAAAGGGAGTATATGATGGTCTAGGGATCCTTATCAGTATCTTATTAGTGGTCTTGGTTACTTCTATTAGTGACTACAAACAGTCCTTGCAATTCATTGAACTAGACAAGGAGAAGAAAAAGATATTTGTCGATGTGACTAGGGATGGAACAAGACAGAAGGTCTCCATATATGATTTGGTTGTGGGAGATGTAGTGCATTTATCAATTGGAGATCAAGTTCCTGCTGATGGAGTTTTTATATCTGGGTATAGTTTGCTGATTGATGAATCAAGTTTAACAGGTGAGAGTGAACCAGTAAATGTATACGATGAGAAGCCTTTTCTTCTCTCAGGCACAAAAGTGCAAGATGGGTCTGGGAAAATGTTAGTGACGGCAGTGGGTATGAAAACTGAATGGGGAAAGTTGATGGAAACCCTAAGTGAGGGAGGAGAAGATGAGACCCCCCTCCAGGTGAAGCTGAATGGTGTTGCAACGCTTATTGGTAAAATCGGTCTGGGGTTTGCAATTTTGACATTTCTGGTGTTAGTAGTGAGGTTTCTGGTGGATAAGTTTATTAACAATGAGCTCTCAGATTGGTCTTCAACGGATGCTCTGAGCCTTCTGAACTACTTTGCTATAGCAGTGACCATAATTGTTGTTGCAGTTCCTGAAGGTTTACCTTTGGCTGTGACCCTTAGTCTTGCTTTTGCCATGAAGAAGCTAATGGATGAAAGAGCACTTGTTAGGCACCTCGCTGCATGTGAGACCATGGGTTCTGCTAGTGGCATTTGCACAGACAAGACAGGGACATTAACCACAAATCATATGGTAGTAAATAAATTATGGATCTCTGAAAAGCCTATAGAGATAAAAGGTCAAGAGAATGATGCTTCATTGAAATCGGAAATATCTGAAGGAGCTCTAGATATCCTCTTGCAGGCTATATTTCAAAATTCTAGCTGTGAAGTGGCGAGAAATAAAGCTGGGAAAACCTCCATTGTGGGAGGAACACCAACAGAATCAGCTATCTTAGAATTTGGCTTGCTTTTGGGTGGGAATTTTGAAGCCCAGCGACAAGAATATGACATCCTTAAAATCGAACCTTTTAATTCTGTTAGGAAGAAGATGTCTGTGCTCGTGGGTCTCCCTAACAGTGGAAAACGTGCTTTCTGCAAAGGCGCATCTGAAATAATATTAAGAATGTGTGACAAGATTATTGATTCCAATGGGGAATCAATTCATCTACCTAAAGAACAGGTACAGAATGTCACAAATGTTATCAATGGTTTTGCCTCTGAAGCTTTAAGAACCCTCTGCTTTGCTTTCAAAGATATAGATGAATCTTTAAATCAGGACTCCTTTCCAGAGAGTGGTTATACATTAATCGCAGTAGTTGGAATCAAGGATCCTGTGCGCCCTGGGGTCAAGGATGCCGTTAAAACTTGTTTAGATGCTGGAATAACTGTCCGAATGGTTACTGGAGATAATATATATACAGCTAAGGCCATAGCTAAGGAATGTGGCATACTTACACCTGGTGGTTTAGCTATAGAAGGACCAGAATTCCGCAATTTGTCTCCTGAACAGATGAAGGAAATTATTCCTAAAATCCAGGTAATGGCCAGGTCTTTACCTGCGGACAAATACACCTTGGTTACAAATTTGCGAAAAATGTTCGGTGAGGTCATTGCAGTGACTGGAGATGGAACCAATGATGCTCCGGCTTTGCATGAGTCGGACATTGGACTAGCTATGGGGATAGCAGGAACAGAGGTAGCTAAAGAAAATGCTGATGTCATCATATTGGACGACAATTTTTCAACTATTGTAAATGTGGCCAAATGGGGACGTGCAGTGTACATAAACATACAAAAGTTTGTTCAATTTCAGCTAACAGTCAACATTGTTGCTCTCATAATCAATTTTGTTTCCGCATGTATCACAGGATCTGCTCCCCTCACGGCTGTACAGTTGCTCTGGGTCAATTTGATCATGGATACTCTAGGTGCACTGGCACTTGCAACCGAACCTCCACATGATGGACTTATGAATAGACCTCCCGTTGGTAGAGGCGTCAACTTCGTTACCAAGGTGATGTGGAGAAATATCATCGGTCAGAGTATATATCAACTGGTTGTCTTAATGGTTCTTAATTTTTATGGAGAGCAACTTCTAGGACTAAGTGGTTCCGATGCTACTGATACTCTTGACACAGTGATATTCAACGCCTTTGTGTTCTGCCAGGTGTTTAATGAAATTAACAGCCGTGACATGGAGAAGATCAATGTGTTTCGCGGGATATTCAGTAGCTGGATATTTCTGGGCGTGATGGTCTCCACAGTGACATTCCAAGCAATCATAGTAGAGTTCTTGGGCACTTTTGCAAGCACCGTGCCACTTAGCTGGCAATTATGGGTACTTAGTGTCTTAATCGGATCGATAAGCATGCCTATTGCAGTTGTATTGAAGCTTGTCCCTGTTGAAAGAGGAGATTCCCCCAAGCATCATGATGGTTATGAACCTCTCCCTTCCGGTCCGGAGCTTGCTTGA | 3108 | 42.5 | MERFLKDFEIENKHSSEEARRRWRSAVSIVKNRRRRFRDVPDLDKLSEAEKKKTKIREKFRVALYVQTAAFHFVDAAGPPAEYNLSEEAREVGFNIHPDELASMVRSHNKAGLKDHGGVNGIARKVSVSLKEGVNEKDIPKRQQIYGLNRYTEKPARNFWVFVWDALQDLTLIILMVCALVSLGVGIATEGWPKGVYDGLGILISILLVVLVTSISDYKQSLQFIELDKEKKKIFVDVTRDGTRQKVSIYDLVVGDVVHLSIGDQVPADGVFISGYSLLIDESSLTGESEPVNVYDEKPFLLSGTKVQDGSGKMLVTAVGMKTEWGKLMETLSEGGEDETPLQVKLNGVATLIGKIGLGFAILTFLVLVVRFLVDKFINNELSDWSSTDALSLLNYFAIAVTIIVVAVPEGLPLAVTLSLAFAMKKLMDERALVRHLAACETMGSASGICTDKTGTLTTNHMVVNKLWISEKPIEIKGQENDASLKSEISEGALDILLQAIFQNSSCEVARNKAGKTSIVGGTPTESAILEFGLLLGGNFEAQRQEYDILKIEPFNSVRKKMSVLVGLPNSGKRAFCKGASEIILRMCDKIIDSNGESIHLPKEQVQNVTNVINGFASEALRTLCFAFKDIDESLNQDSFPESGYTLIAVVGIKDPVRPGVKDAVKTCLDAGITVRMVTGDNIYTAKAIAKECGILTPGGLAIEGPEFRNLSPEQMKEIIPKIQVMARSLPADKYTLVTNLRKMFGEVIAVTGDGTNDAPALHESDIGLAMGIAGTEVAKENADVIILDDNFSTIVNVAKWGRAVYINIQKFVQFQLTVNIVALIINFVSACITGSAPLTAVQLLWVNLIMDTLGALALATEPPHDGLMNRPPVGRGVNFVTKVMWRNIIGQSIYQLVVLMVLNFYGEQLLGLSGSDATDTLDTVIFNAFVFCQVFNEINSRDMEKINVFRGIFSSWIFLGVMVSTVTFQAIIVEFLGTFASTVPLSWQLWVLSVLIGSISMPIAVVLKLVPVERGDSPKHHDGYEPLPSGPELA | 1035 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 13 | 6051084 | 6056639 | + | Conep13aG0060500.1 | Cone13ag0581 | 450968 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone13ag0581 | 1035 | CDD | P-type_ATPase_Ca_PMCA-like | 141 | 885 | - | - | |
| Cone13ag0581 | 1035 | FunFam | Calcium-transporting ATPase | 15 | 75 | - | - | |
| Cone13ag0581 | 1035 | FunFam | Calcium-transporting ATPase | 460 | 656 | - | - | |
| Cone13ag0581 | 1035 | SUPERFAMILY | HAD-like | 449 | 857 | IPR036412 | - | |
| Cone13ag0581 | 1035 | SFLD | p-type atpase | 432 | 804 | IPR044492 | - | |
| Cone13ag0581 | 1035 | SFLD | Haloacid Dehalogenase | 432 | 804 | - | - | |
| Cone13ag0581 | 1035 | FunFam | Calcium-transporting ATPase | 212 | 333 | - | - | |
| Cone13ag0581 | 1035 | Pfam | Ca2+-ATPase N terminal autoinhibitory domain | 6 | 48 | IPR024750 | GO:0005516(InterPro) | |
| Cone13ag0581 | 1035 | SMART | Cation_ATPase_N_a_2 | 115 | 187 | IPR004014 | - | |
| Cone13ag0581 | 1035 | Pfam | haloacid dehalogenase-like hydrolase | 605 | 764 | - | - | |
| Cone13ag0581 | 1035 | Gene3D | - | 460 | 656 | IPR023299 | GO:0000166(InterPro) | |
| Cone13ag0581 | 1035 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 117 | 1013 | IPR023298 | - | |
| Cone13ag0581 | 1035 | PRINTS | P-type cation-transporting ATPase superfamily signature | 776 | 788 | - | - | |
| Cone13ag0581 | 1035 | PRINTS | P-type cation-transporting ATPase superfamily signature | 649 | 660 | - | - | |
| Cone13ag0581 | 1035 | PRINTS | P-type cation-transporting ATPase superfamily signature | 752 | 771 | - | - | |
| Cone13ag0581 | 1035 | PRINTS | P-type cation-transporting ATPase superfamily signature | 450 | 464 | - | - | |
| Cone13ag0581 | 1035 | PRINTS | P-type cation-transporting ATPase superfamily signature | 281 | 295 | - | - | |
| Cone13ag0581 | 1035 | PRINTS | P-type cation-transporting ATPase superfamily signature | 671 | 681 | - | - | |
| Cone13ag0581 | 1035 | FunFam | Calcium-transporting ATPase | 769 | 1015 | - | - | |
| Cone13ag0581 | 1035 | Gene3D | - | 447 | 797 | IPR023214 | - | |
| Cone13ag0581 | 1035 | Pfam | Cation transport ATPase (P-type) | 506 | 591 | - | - | |
| Cone13ag0581 | 1035 | Pfam | E1-E2 ATPase | 235 | 428 | - | - | |
| Cone13ag0581 | 1035 | SUPERFAMILY | Calcium ATPase, transduction domain A | 235 | 331 | IPR008250 | - | |
| Cone13ag0581 | 1035 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 452 | 458 | IPR018303 | - | |
| Cone13ag0581 | 1035 | PRINTS | H+-transporting ATPase (proton pump) signature | 752 | 768 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cone13ag0581 | 1035 | PRINTS | H+-transporting ATPase (proton pump) signature | 784 | 809 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cone13ag0581 | 1035 | PRINTS | H+-transporting ATPase (proton pump) signature | 609 | 627 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cone13ag0581 | 1035 | Gene3D | - | 15 | 76 | - | - | |
| Cone13ag0581 | 1035 | Pfam | Cation transporter/ATPase, N-terminus | 116 | 182 | IPR004014 | - | |
| Cone13ag0581 | 1035 | NCBIfam | HAD-IC family P-type ATPase | 716 | 840 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cone13ag0581 | 1035 | NCBIfam | HAD-IC family P-type ATPase | 548 | 696 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cone13ag0581 | 1035 | NCBIfam | HAD-IC family P-type ATPase | 202 | 472 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cone13ag0581 | 1035 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 456 | 661 | IPR023299 | GO:0000166(InterPro) | |
| Cone13ag0581 | 1035 | Pfam | Cation transporting ATPase, C-terminus | 837 | 1010 | IPR006068 | - | |
| Cone13ag0581 | 1035 | FunFam | Calcium-transporting ATPase | 649 | 797 | - | - | |
| Cone13ag0581 | 1035 | Gene3D | - | 165 | 1010 | - | - | |
| Cone13ag0581 | 1035 | PANTHER | CATION TRANSPORTING ATPASE | 75 | 1013 | - | GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER) | |
| Cone13ag0581 | 1035 | NCBIfam | calcium-translocating P-type ATPase, PMCA-type | 111 | 1014 | IPR006408 | GO:0005388(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0070588(InterPro) | |
| Cone13ag0581 | 1035 | Gene3D | - | 133 | 333 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone13ag0581 | Cone-Chr13:6051084 | Cone6ag1463 | Cone-Chr6:11673578 | 0 | dispersed | |
| Cone13ag0581 | Cone-Chr13:6051084 | Cone5ag1028 | Cone-Chr5:4484233 | 0 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone13ag0581 | K01537 | - | mdm:103423267 | 1545.41 |