Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone13ag0642 | ATGGACCTCCTCCTTTCCCCATCCTCGTCCTCCTTCTTCTTCCTCTTCTTCTTCTTCGCCCTTCTTTCTCTCTACATCTACCGTCTCTTCTCCACCACTACATCAAAAGAACAACTAATAACAACCCATGGCTTTAAGATCTACCCCATAGTCGGAACCTTGCCCGACTTCCTCCTGAACCGGCACCGTTTTCTCGACTGGACCACAGACGTCCTTCGCGACTGCCCAACGAATACTTCCACATTTTGTAGGCCGGGAAAAGTCCAAGGAATCATCACAGCCAACGCGTTGAACGTCGAGCACTTCCTCAAGACCAACTTCGAAAACTACCCGAAAGGCCATCGCTTTATATCTCTCCTCCAAGACTTTCTCGGCCGAGGAATTTTCAACTCCGACGGCGAAATCTGGAAGGTGCAGAGAAAAACCGCCAGCTACGAGTTCAACACGAGGTCGTTGCGAAATTTTGTTATCGAAAACGTCACCGTTGAGAACCGGACCAGATTGATCCCTGTTCTGGAGAAAGCTTACGAAGTGGAACGCGTTCTGGATCTGCAGGACGTTTTGGAGCGTTTCGCGTTCGACAATGTCTGCAAACTTGCGTTCAACATCGACCCGGGCTGTCTTGGTGGCGATGGAACCGCCGGTTCAGGGTTCATGAGGGATTTCGAAAATGCAGCCACGCTTAGTTCTGGCCGGTTCATGTACGCTATTCCGTTCGTGTTCAAGATTAAGAAGTTCTTCAACTTGGGATCGGAGAAAGAGCTGAAAGAAGCAATAGCGACGGTTCATAAATTCGCCGACGATATCATAATTCAAAGGATGGAAGAGAAGATCGCCAGAAAACAAGACGAGGATCTCCTCTCACGCTTTATCGGCAAAGGAGACGATATCTCTCCCGATTTTCTCCGAGATATTATTATAAGCTTCATTCTGGCAGGCCGAGACACGACATCTTCCGGTTTAAGCTGGTTCTTCTGGATCTTATCATCAAGACCTGACGTGGAGGAAAAAATACTGAACGAGCTCGAAACGGTTCGTTCCAGAAACGGGAAAAAACCGGGCGATTCGTACAGTTTCGACGAAATCCGTGACATGCAGTTCCTCCACGCCGCTATTTCCGAAACGATGAGGCTGTACCCGCCTGTACCGGTCGACACGAGGGCTTGTTTGAGAGACGACGTGTTACCTGACGGAACCTTTGTCGGGAAAGATTGGTTTGTGACGTATCACACGTATGCGATGGGGAGGATGGAGAGTTTGTGGGGGAAGAACTGCTGCGAGTTTGTTCCGGAAAGGTGGTTGGAAAACGGAGTTTGCAAGGTTGAAAGTCCGTTTCGTTTCCCGGTTTTTCATGCCGGGCCCAGGATGTGTTTGGGGAAAGAAATGGCGTATATTCAGATGAAGTCGATTGCAGCGGCGGTTATAGAGCGGTTCAGGATTGAGGTTGTTGGTGAGAGCAAGGATAGAGTGCCTGATCACTTGTTGTCTTTGACTCTGAGAATGAAAGACGGGCTACGTGTACGTGTCAGGACTAGATGA | 1539 | 49.25 | MDLLLSPSSSSFFFLFFFFALLSLYIYRLFSTTTSKEQLITTHGFKIYPIVGTLPDFLLNRHRFLDWTTDVLRDCPTNTSTFCRPGKVQGIITANALNVEHFLKTNFENYPKGHRFISLLQDFLGRGIFNSDGEIWKVQRKTASYEFNTRSLRNFVIENVTVENRTRLIPVLEKAYEVERVLDLQDVLERFAFDNVCKLAFNIDPGCLGGDGTAGSGFMRDFENAATLSSGRFMYAIPFVFKIKKFFNLGSEKELKEAIATVHKFADDIIIQRMEEKIARKQDEDLLSRFIGKGDDISPDFLRDIIISFILAGRDTTSSGLSWFFWILSSRPDVEEKILNELETVRSRNGKKPGDSYSFDEIRDMQFLHAAISETMRLYPPVPVDTRACLRDDVLPDGTFVGKDWFVTYHTYAMGRMESLWGKNCCEFVPERWLENGVCKVESPFRFPVFHAGPRMCLGKEMAYIQMKSIAAAVIERFRIEVVGESKDRVPDHLLSLTLRMKDGLRVRVRTR | 512 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 13 | 6450339 | 6451877 | - | Conep13aG0066600.1 | Cone13ag0642 | 451029 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone13ag0642 | 512 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 450 | 459 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone13ag0642 | 512 | SUPERFAMILY | Cytochrome P450 | 44 | 512 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0642 | 512 | PRINTS | P450 superfamily signature | 457 | 468 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0642 | 512 | PRINTS | P450 superfamily signature | 448 | 457 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0642 | 512 | PRINTS | P450 superfamily signature | 370 | 381 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0642 | 512 | PRINTS | P450 superfamily signature | 312 | 329 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0642 | 512 | PANTHER | CYTOCHROME P450 | 25 | 505 | - | - | |
| Cone13ag0642 | 512 | Pfam | Cytochrome P450 | 85 | 497 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0642 | 512 | PRINTS | E-class P450 group I signature | 369 | 387 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0642 | 512 | PRINTS | E-class P450 group I signature | 447 | 457 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0642 | 512 | PRINTS | E-class P450 group I signature | 457 | 480 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0642 | 512 | PRINTS | E-class P450 group I signature | 321 | 347 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0642 | 512 | PRINTS | E-class P450 group I signature | 301 | 318 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0642 | 512 | Gene3D | Cytochrome P450 | 24 | 512 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0642 | 512 | CDD | CYP86A | 85 | 505 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone13ag0642 | Cone-Chr13:6450339 | Cone16ag0020 | Cone-Chr16:148165 | 2.74E-139 | dispersed | |
| Cone13ag0642 | Cone-Chr13:6450339 | Cone19ag0644 | Cone-Chr19:5523495 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone13ag0642 | - | - | - | 0.0 |