Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag0643 ATGGAGTCAAATGGATGCTTCGGAAGCTTCCTTCAAACGGCCAAGCCTTATATCGCAATGATCTCTCTCCAGTTCGGCTATGCCGGCATGAACATCATCACTAAAGTCTCACTCAACCGTGGGATGAGTCATTACGTGCTTGTTGTCTATAGACACGCCTTTGCCACCGCTGCTATGGCCCCCTTTGCTCTCGTTCTCGAGAGGAAAGTCCGGCCTAAGATCACATTCTCAATTTTCATGCAACTCTTTGTTCTAGGCCTTCTCGGCCCTGTCATCGATCAGAATTTCTACTACGCTGGACTCAAATTCACCTCCCCAACCTTCTCTTGCGCAATGAGTAACATGCTCCCCGCAATGACATTCGTCCTGGCCGTCCTATGCAGGATGGAGAAGTTGAACATGAAGAAGGTTATGTGTCAAGCGAAGGTGGCTGGGACGATAGTGACCGTGGCAGGAGCGATGTTAATGACATTATACAAAGGAAATGTTGTTAACATCTTTTGGACATCACATCTTCATCCTATCAACTCCTCTTCCCCGGCAGATTCTGCAGCCGTAGGCAACAGTGACAAGGACTGGCTCAAAGGTTCCATCATGCTTATCATTGCAACATTGGCTTGGGCTTTCTTCTTCATTCTTCAAGCAGTGACAATGAAGAAATACACGGCTCATCTTTCTCTTACAACACTCGTATGCTTCTTGGGAACCCTACAATCCATTGCCGTCACCTTTGTCATGGAGCAAAAGCCGTCCGCCTGGACCATTGGCTGGGACATGAACCTTCTCGCTGCAGCTTATGCCGGAATAGTCTCATCAGGGATTGCCTACTATGTGCAAGGGCTAGTGATGCAGAAAAGAGGGCCCGTTTTTGTCACGGCTTTTAGCCCCTTGATGATGATCATTGTTGCTATTATGGGCTCATTCATCCTTGCGGAGAAGATATACGTCGGAGGTTTGCTTGGAGCTGGACTTATTATAATAGGACTATACTCGGTTCTATGGGGCAAATACAAGGAGTACAAGGAGAAGCAAGCAGAAGAAATTCCAGAAGTCATAAAGGCTGCTTCATGCGGGGGAGATCAAAGCGTGAGGGTGGAAACTGTGATTGAAGATACTAATGAACCGATCAATGACATTGAAATGCAGAAGAACCAAGCCGGTACCATGGTAGCCGCAAGATTGGCACGGGTTTAA 1194 47.32 MESNGCFGSFLQTAKPYIAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAAMAPFALVLERKVRPKITFSIFMQLFVLGLLGPVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVLAVLCRMEKLNMKKVMCQAKVAGTIVTVAGAMLMTLYKGNVVNIFWTSHLHPINSSSPADSAAVGNSDKDWLKGSIMLIIATLAWAFFFILQAVTMKKYTAHLSLTTLVCFLGTLQSIAVTFVMEQKPSAWTIGWDMNLLAAAYAGIVSSGIAYYVQGLVMQKRGPVFVTAFSPLMMIIVAIMGSFILAEKIYVGGLLGAGLIIIGLYSVLWGKYKEYKEKQAEEIPEVIKAASCGGDQSVRVETVIEDTNEPINDIEMQKNQAGTMVAARLARV 397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 6466531 6468106 + Conep13aG0066700.1 Cone13ag0643 451030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag0643 397 Pfam EamA-like transporter family 195 333 IPR000620 GO:0016020(InterPro)
Cone13ag0643 397 Pfam EamA-like transporter family 17 156 IPR000620 GO:0016020(InterPro)
Cone13ag0643 397 SUPERFAMILY Multidrug resistance efflux transporter EmrE 233 337 - -
Cone13ag0643 397 PANTHER WAT1-RELATED PROTEIN 18 346 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cone13ag0643 397 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 159 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0643 Cone-Chr13:6466531 Cone3ag0503 Cone-Chr3:2497111 5.13E-212 dispersed
Cone15ag0154 Cone-Chr15:738176 Cone13ag0643 Cone-Chr13:6466531 2.42E-89 transposed
Cone13ag0643 Cone-Chr13:6466531 Cone19ag0646 Cone-Chr19:5539031 7.83E-264 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag0643 - - - 0.0