Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone13ag0648 | ATGGGGCAACTTGCTGATGACAATGGAAAGTTCCATACTTATCAAGAGAGTGTAGCTGGTCCAATCAGGGGGAAGATTTGTTCAGAAGAGATTCTTGCATGGAGAAGAGCTCTGGTAAGAAAATCTAGTTTGATTCCTTGTCTGATTCTTTGGGATACGAGCCCATACTTTCTTGGGGATCATTTGCTACCTGTGGGAGAAGGGAAACTATGGAGGATACACATTTCCTTATCCCTCATTTCTCTAGTGAAGATGTCCATGTCTTTGGTATCTTTGATGGCCATAGAGGTTCATAATGTTCAGCTGATGCGTTATCAGAAGCATTCATCAAAACAGAAATCACATTTACAAATGAGCTCGATTCACATCGTAAATCCAAGAGAGTTAGTTATTCAGAAAGACTGGCATCCGGGTTGGACTGCCATTGTCACCCTCATCGTTAAAAACAAGCTCTTTGTTGCAAATTCCGGTGATTGTAGGACGATTTTGTGTCGGGCAGGCCAGCCCAGTGCTTTAAAGCCGGTCACTCGTTCAACTGGTGATGATGACCTAAAACCGACTGTAACAGCAGAACCCGAGACAACTGAAACTGTTTTGTCAGGGGATGATGACTATCTTCAATTCAGAGGTAGTGAGGATAATAAGGGATATACTGTAAAAGAGCCTGGAATGTGTTCTAAGAGATTAGCAACAGAAGCCGCAGAAAGAGGAAGTAAAGATACTATAACGGTGATCGTCGCGTTCCTCCGCCCGGTATCTATGGCTGAGGGAATATACTAG | 780 | 43.33 | MGQLADDNGKFHTYQESVAGPIRGKICSEEILAWRRALVRKSSLIPCLILWDTSPYFLGDHLLPVGEGKLWRIHISLSLISLVKMSMSLVSLMAIEVHNVQLMRYQKHSSKQKSHLQMSSIHIVNPRELVIQKDWHPGWTAIVTLIVKNKLFVANSGDCRTILCRAGQPSALKPVTRSTGDDDLKPTVTAEPETTETVLSGDDDYLQFRGSEDNKGYTVKEPGMCSKRLATEAAERGSKDTITVIVAFLRPVSMAEGIY | 259 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 13 | 6507536 | 6509039 | + | Conep13aG0067200.1 | Cone13ag0648 | 451035 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone13ag0648 | 259 | MobiDBLite | consensus disorder prediction | 174 | 194 | - | - | |
| Cone13ag0648 | 259 | CDD | PP2Cc | 140 | 249 | IPR001932 | - | |
| Cone13ag0648 | 259 | SMART | PP2C_4 | 51 | 247 | IPR001932 | - | |
| Cone13ag0648 | 259 | SUPERFAMILY | PP2C-like | 132 | 251 | IPR036457 | - | |
| Cone13ag0648 | 259 | Gene3D | - | 175 | 256 | IPR036457 | - | |
| Cone13ag0648 | 259 | Pfam | Protein phosphatase 2C | 127 | 170 | IPR001932 | - | |
| Cone13ag0648 | 259 | Gene3D | - | 81 | 174 | IPR036457 | - | |
| Cone13ag0648 | 259 | ProSiteProfiles | PPM-type phosphatase domain profile. | 1 | 249 | IPR001932 | - | |
| Cone13ag0648 | 259 | PANTHER | PROTEIN PHOSPHATASE | 128 | 172 | IPR015655 | GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone13ag0648 | Cone-Chr13:6507536 | Cone19ag0650 | Cone-Chr19:5557915 | 5.12E-53 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone13ag0648 | - | - | - | 0.0 |