Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag0662 ATGGATTTTCGTCTGGTTTCGGCGAGGAATCCAGCTATGTATATCTCCTCCTCCTCCTCCTCCTCCTTCTCCTCCTCCTCCTCCTTCTTCTTCTTCTTCTTCCTCTTCTTCGTGTTGATTTCTATGAAGATTCGGCTGGTTGGGGCAGGAGATGCAGAGACGCTTCTAACAATGAAAGCTACAATCGACCGTGGAAACTCGCTTCCATGGAGATTAGGAACCTCCGTTTGCGAGTGGAAAGGCGTGAAAGAATGTACGAATGGTAGAGTTACAAAGCTCGCTTTAGAGTATTTGAATCTCACCGGAATTCTCGATCATAAGATCTTGAACCGATTGGATCAGCTTCGTGTTCTCAGCTTCAAATCCAATTCACTCTTCGGCCAAATACCCGATCTCTCCGGCCTCGTCAATCTCAAATCTCTTTTCCTCAACGAAAACTCCTTCTCCGGTGAGTTCCCGGCCTCACTCTCCGTCCTCCACCGCTTGAAAGTAGTCGTCCTGGCCGAAAACCAAATCTCCGGCCAAATTCCAGACTCGATGCTCAAACTCAAGCGACTCTACGTCCTCTACTTGCAGGACAACCAACTCACCGGAACTATCCCGCCATTTAACCAAACCAGTCTCAGATTCTTCAACGTCTCTAACAACTTCCTCTCTGGCGAGATCCCGCTAACTCCCGCCGTAGTCCGATTCAACACGTCGTCATTCTCAGGTAACATCGACCTCTGCGGGGATCAAATCAACAACCCCTGCAAACCAACAATATCCGCACCACCAGCATTGAGTCCAAGCTATCCAAAACCACCGTCCAAACGCCCCAAACTAATCAAAATCATTGCCGGAAGCGTAGGCGGATTCATCGGACTCCTACTCTGCCTGGTGGCGCTCTGTGTAGTCTGTTCAAAACGCGAGGGAAGAAGAAAGGACTCGAAGGAGATAATAATGAGTAAGAAAGAAGTGGAAGCGATGGAGGGTGGAGGAGGAAGGGGAGGAGCAGGTGGTGGTGGTGGTGGTGGTGGCGGAGGAGGTAATAACGGAGGAAAGCAAGGGGAATTTCAATGGGAAGGAGAGGGAGGTCTAGGGAGCTTAGTGTTCTGCGGAGCAGGGGATCAGAAAATGAGCTACAGCTTAGAGGATTTATTAAAAGCGTCGGCTGAAACGTTAGGGAGAGGGACGATAGGGAGTACGTATAAAGCGGTGATGGAGTCTGGGTTTATAGTTACAGTTAAGAGGCTGAAAGATGCAAAGTACCCGAGCGTTGATCAATTCACGAGACAGATGGAGGTTCTCGGTAGGTTGACTCATCCACATCTGGTGCCTCTCAGAGCTTATTTCCAGGCTAAGGAGGAACGCCTGCTCGTATACGATTACTTCCCAAACGGCAGTCTATTCTCTCTCATCCACGGATCAAGAAGTTCAGGCGGTGGAAAGCCACTCCACTGGACATCATGCCTGAAAATAGCCGAAGACCTAGCAACCGCTTTGCTCTACATCCATCAAAACCCGGCCGGCTTGACTCACGGAAACTTAAAATCTTCTAACATCCTCTTAGGCTCTGATTTCGAGTCCTGCCTAACCGATTACGGTCTCACCTCATTCCGAGACCCTGACTCTCTAGAAGAACCAAGTGCAACATCTCTCTTCTACAGAGCCCCTGAATGCCGTGACATTAGAAAGCCCATAACTCAACAAGCCGACATATACAGCTTTGGAGTCCTCCTTTTGGAGCTTCTAACCGGAAAGACACCTTTCCAAGACCTTGTCCAAGAACATGGCCCGGATATTCCTAGATGGGTTAGGTCTGTTCGAGAGGAAGAGACCGAGTCAGGGGACGACCCTGCCTCGGCTTCTGAGGAGAAACTCCAGGTGCTTCTAAACATAGCAATGGCTTGTGTCTCTGTGGCGCCCGAGAACCGGCCTACTATACGAGAGGTTTTGAAGATGATTAGAGATACAAGGGCCGAGGCTCAAGTGTCGTCTAATAGTAGTGACCACTCGCCAGGGAGATGGTCGGATACAGTTCAGAGTTTGCCTAGGGAGGAACATTTGAGTATCTGA 2058 49.61 MDFRLVSARNPAMYISSSSSSSFSSSSSFFFFFFLFFVLISMKIRLVGAGDAETLLTMKATIDRGNSLPWRLGTSVCEWKGVKECTNGRVTKLALEYLNLTGILDHKILNRLDQLRVLSFKSNSLFGQIPDLSGLVNLKSLFLNENSFSGEFPASLSVLHRLKVVVLAENQISGQIPDSMLKLKRLYVLYLQDNQLTGTIPPFNQTSLRFFNVSNNFLSGEIPLTPAVVRFNTSSFSGNIDLCGDQINNPCKPTISAPPALSPSYPKPPSKRPKLIKIIAGSVGGFIGLLLCLVALCVVCSKREGRRKDSKEIIMSKKEVEAMEGGGGRGGAGGGGGGGGGGGNNGGKQGEFQWEGEGGLGSLVFCGAGDQKMSYSLEDLLKASAETLGRGTIGSTYKAVMESGFIVTVKRLKDAKYPSVDQFTRQMEVLGRLTHPHLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSRSSGGGKPLHWTSCLKIAEDLATALLYIHQNPAGLTHGNLKSSNILLGSDFESCLTDYGLTSFRDPDSLEEPSATSLFYRAPECRDIRKPITQQADIYSFGVLLLELLTGKTPFQDLVQEHGPDIPRWVRSVREEETESGDDPASASEEKLQVLLNIAMACVSVAPENRPTIREVLKMIRDTRAEAQVSSNSSDHSPGRWSDTVQSLPREEHLSI 685
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 6608801 6612824 - Conep13aG0068600.1 Cone13ag0662 451049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag0662 685 Pfam Protein kinase domain 385 647 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone13ag0662 685 Gene3D Phosphorylase Kinase; domain 1 366 457 - -
Cone13ag0662 685 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 46 655 IPR046959 -
Cone13ag0662 685 SUPERFAMILY L domain-like 70 226 - -
Cone13ag0662 685 Pfam Leucine rich repeat N-terminal domain 50 82 IPR013210 -
Cone13ag0662 685 Pfam Leucine Rich Repeat 137 158 IPR001611 GO:0005515(InterPro)
Cone13ag0662 685 Gene3D Transferase(Phosphotransferase) domain 1 458 673 - -
Cone13ag0662 685 Gene3D Ribonuclease Inhibitor 204 255 IPR032675 -
Cone13ag0662 685 FunFam Nuclear pore complex protein NUP107 48 202 - -
Cone13ag0662 685 Gene3D Ribonuclease Inhibitor 49 203 IPR032675 -
Cone13ag0662 685 MobiDBLite consensus disorder prediction 324 349 - -
Cone13ag0662 685 MobiDBLite consensus disorder prediction 656 685 - -
Cone13ag0662 685 SUPERFAMILY Protein kinase-like (PK-like) 386 649 IPR011009 -
Cone13ag0662 685 ProSiteProfiles Protein kinase domain profile. 382 654 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0662 Cone-Chr13:6608801 Cone9ag1338 Cone-Chr9:10055351 9.76E-135 dispersed
Cone13ag0662 Cone-Chr13:6608801 Cone19ag0659 Cone-Chr19:5611580 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82024 PF00443 UCH 9.30E-84 CL0125 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag0662 - - - 0.0