Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag0665 ATGGAGGTAAGTGCTGCGGAAAATCCGATCGTCAAGCTCGCTACTGGAGAAAAAATTCAGCCGCTATCCGAAATGACGAGTTCTGAAGAATCTCCAAGAAAGTGCGAGAAAGTCGATGAAATTCCGTTGGATGATGATTCAAGCTCGGACGATTTGGGGATACGAAAACGGATAGGTAACCTAACTGCGGATTCGATGGATCAATCTGGATTAGAAAATACTGAAACTATCTCGCTTTCCATGGCCGATAAATCGGACGAAAAGGTTACGAAGATTATTTCGCCCGAAAATCACGAGTCGGATGGAGGAGATTTAATAGCCGTTGCGTCTCAAATTAAAGCCAACGGTGGCGTAGGCATAGTGGGACCTCTCTCGCAGCTTCCAAAGCCAGAGGCGCCACCTGGCCTCTCCTCATCAAACGGTGATATCTTCTACCAGCGATCTCATTCCTCGCCGGAAAACATGACCATCGACATGCCGGCCATCGGAAAGTTCATCAGAGAGAGAAGCAATTCCGTCTCGGCTGCGATCGCCAAAAAATTAACATCCTTGAAAGACGGTAACAGCAACGTCAACGGGACCGATGCAGCAGCCTATCTCAAGGGAAAGTTTAACACCGGAGTGACGGAGTTCAATCTCACAGGAATGAAGGTGATAGTCCAAAAGACAGATGAAACAGAGAGACCAGGATCGAGAGATCATCATCAGCTGAAAGGAAGAATCAGCTTCTTCTCGAGGTCTAGTTGCAGAGATTGCACGGCGGTTCGTAGGTTCTTCAGAGAGAGAGGATTGAAATACGTGGAGATCAACATCGACGTGTTTCCTCAAAGAGAGAAGGAGCTCGTCGAGAGGACTGGAAGCTCCTCTGTTCCGACAATATTCTTCAACGAGAAGTTGTTCGGAGGTTTAGTGGCGTTGAATTCGCTGCGAAACAGCGGCGATGATCAGTTTGACCAGAGGTTGAAGGAGCTACTCGGCTGTAAATGCCCAGACGATGCACCTGCACCGCCGGTATACGGTTTTGATGATCCCGAGGAGGAAGATAGTAGATCAACGGACGAGATGCTCGGAATCGTTGGAGTTCTGAGGCAGAGATTGCCGATTCATGACCGTCTGATGAAGATGAAAATCGTTAAGAACTGCTTCTCAGGTAGTGAGATGGTCGAGGCGCTAATCCAACAGTTGGATTGTGGACGCAAAAAGGCTATTGGGATAGGAAAGCAGCTTGCCAAGAAGCATTTCATCAACCATGTCTTTGGGGAAAATGAATTTGAAGATGGAAACCATTTCTACCGTTTCCTTGAGCACGAATCTTTCATTCCTAGGTGCTTCAATTTCCGTGGCTCGACAAATGACAAGGAACCCATGCCGGCTGCATTAGTTGGCCTGAGACTCGCCAAGATCATGTCTGCTATTCTCGAATCATATGCCTCTGAAGATAGACAACATGTCGATTACCTCGCCATAAGCAACAGTGAAGAATTCCGCAGGTACGTAAATTTGATACAGGAGCTACACCGGGTGGACCTGCTACAACTCACGGCAGATGAGAAGTTAGCGCTTTTCTTGAACCTGTACAATGCTATGGTAATCCATACAGTAATCAGGTACGGGTGTGCACAGGGTGTAATCAATCGGAGATCATTCTTTACCGAGTTCCAATACTTAATCGGAGGGTTCCCCTATTCTCTTCATACTATCAAGAATGGAATCCTCAGAAATAACAGAAGACCTCCCTTTTCATTCACCAAGCCTCTAGCAGGAGGAGATGCCCGTTTAGAGCTTGCTTTTGCTAAAGTGAACCCTTTGATTCACTTTGGGCTTTGCAACGGGTCAAGGTCTAGCCCACCGGTCCGGTTTTTTACACCTCAAGGGGCAGAGGCAGAGCTGAGATGTGCTGCCAGAGAGTTTTTCCAAAATGGGGGAATGGATGTAAACTTGGATAGGAGGGTTGTGGTTCTAAGTGGGATAATTAAGGAGTATAAGGCGGATTTTGGACAGGATAAGGAGATTTTGAAATGGATCATCAGCTTCTTGGATCCGACCAAAGCGGGTTTGTTGATGCATCTGTTGAACGATGGAGGCCCGATTAATGTAGTTTACCAGTATTATGATTGGTCTGTGAATTGCTGA 2133 46.84 MEVSAAENPIVKLATGEKIQPLSEMTSSEESPRKCEKVDEIPLDDDSSSDDLGIRKRIGNLTADSMDQSGLENTETISLSMADKSDEKVTKIISPENHESDGGDLIAVASQIKANGGVGIVGPLSQLPKPEAPPGLSSSNGDIFYQRSHSSPENMTIDMPAIGKFIRERSNSVSAAIAKKLTSLKDGNSNVNGTDAAAYLKGKFNTGVTEFNLTGMKVIVQKTDETERPGSRDHHQLKGRISFFSRSSCRDCTAVRRFFRERGLKYVEINIDVFPQREKELVERTGSSSVPTIFFNEKLFGGLVALNSLRNSGDDQFDQRLKELLGCKCPDDAPAPPVYGFDDPEEEDSRSTDEMLGIVGVLRQRLPIHDRLMKMKIVKNCFSGSEMVEALIQQLDCGRKKAIGIGKQLAKKHFINHVFGENEFEDGNHFYRFLEHESFIPRCFNFRGSTNDKEPMPAALVGLRLAKIMSAILESYASEDRQHVDYLAISNSEEFRRYVNLIQELHRVDLLQLTADEKLALFLNLYNAMVIHTVIRYGCAQGVINRRSFFTEFQYLIGGFPYSLHTIKNGILRNNRRPPFSFTKPLAGGDARLELAFAKVNPLIHFGLCNGSRSSPPVRFFTPQGAEAELRCAAREFFQNGGMDVNLDRRVVVLSGIIKEYKADFGQDKEILKWIISFLDPTKAGLLMHLLNDGGPINVVYQYYDWSVNC 710
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 6619158 6622622 - Conep13aG0068900.1 Cone13ag0665 451052

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag0665 710 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 62 710 - -
Cone13ag0665 710 SMART DEP_3 362 435 IPR000591 GO:0035556(InterPro)
Cone13ag0665 710 CDD DEP 361 432 - -
Cone13ag0665 710 Pfam Protein of unknown function, DUF547 512 637 IPR006869 -
Cone13ag0665 710 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 366 433 IPR000591 GO:0035556(InterPro)
Cone13ag0665 710 MobiDBLite consensus disorder prediction 29 52 - -
Cone13ag0665 710 Gene3D - 350 488 IPR036388 -
Cone13ag0665 710 ProSiteProfiles Glutaredoxin domain profile. 229 328 - -
Cone13ag0665 710 CDD GRX_DEP 239 311 - -
Cone13ag0665 710 Gene3D Glutaredoxin 237 325 - -
Cone13ag0665 710 MobiDBLite consensus disorder prediction 1 52 - -
Cone13ag0665 710 SUPERFAMILY Thioredoxin-like 239 313 IPR036249 -
Cone13ag0665 710 Pfam Glutaredoxin 243 299 IPR002109 -
Cone13ag0665 710 ProSiteProfiles DEP domain profile. 362 435 IPR000591 GO:0035556(InterPro)
Cone13ag0665 710 SUPERFAMILY Winged helix DNA-binding domain 351 459 IPR036390 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag0665 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0665 Cone-Chr13:6619158 Cone7ag0803 Cone-Chr7:5854363 1.35E-15 dispersed
Cone7ag1572 Cone-Chr7:10770613 Cone13ag0665 Cone-Chr13:6619158 9.36E-110 transposed
Cone13ag0665 Cone-Chr13:6619158 Cone19ag0662 Cone-Chr19:5621440 1.12E-84 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g1073 . . . . . . Bma14g01625 . . . . . . . . . . . . . . . . . . . . . . . . Cone13ag0665 Cone19ag0662 . . . . . . . . Bda07g01448 . Bpe11g01619 . . . . . Cmo15g00895 . Cma15g00860 . Car15g00811 . . . . . . . . . . . . . . . . . . Chy09g00445 Cme09g01240
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007007 2 1 2 1 2 1 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 0 1 1 1 1 1 2 1 1 37