Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag0687 ATGCCATTGAAACTTTTGCCCTCTGAATTGTTTGTTTGGTTAAGAAAAACCAGTGAGTGTGTAAAAGTAGAAATTTTTTTGATGGGGTGTATATGCTCGAAAGGGGGGTCCACAGATGAGGACCATGGAAAAGAGAAGCAGTTAAAATCGAATAAATCTTCGAGGCAGTTAGGTGCTTCCTTGAGGAAAGAAGAAGTCATAGTGGATGGAGATGGAGGTGGAAATGAAGCGACTGTTCGGTTAATAGAGAATAGAGGGTCTACACAAATATCGGATGATGATAATGAAGAGAAAGGTTCAAAGTTACAGATTGAGAAATCACAGTCTACCATTGAGAGGCCTTCTCTATCTAGGATTTCTAATTTCAGCAATGGAGAAAAAGGGGCACAGGTTGTTGCTGGATGGCCTTCTTGGCTTACCTCTGTGGCTGGAGAAGCCATTAATGGATGGTTGCCTAGAAAGGCAGAGTCTTTTGAGAAGTTGGACAAGATTGGGCAAGGAACATACAGCAGTGTGTATAGAGCACGGGATCTAGAAACATGCAAGATGGTTGCATTGAAGAAGGTCCGATTTGCAAACATGGATCCAGAGAGTGTTCGGTTTATGGCTAGAGAAATAATGATTTTGCGTAGGCTTGATCATCCCAATGTTATGAAGCTTGAAGGCCTAATTACTTCAAGAGTATCTGGCAGCTTATACCTCATTTTCGAGTATATGGAGCATGATCTTGCCGGGCTTGCAGCCAACCCTGCGATCAAATTCACAGAAGCCCAAATTAAGTGTTTTATGCGGCAACTACTTCTAGGCCTTGAACATTGTCATATTCTCGGTGTTTTGCATAGAGACATAAAGGGTTCAAATCTTCTGATTGATAATAATGGGAATTTAAAGATTGGGGATTTTGGGCTTGCGACTTTCTTACGGCCTCATCAGAAGCAGCCACTTACAAGCCGAGTTGTTACTTTGTGGTATAGGCCCCCTGAGCTTTTGCTCGGTTCTACGGATTATGGAGTTTCTGTGGATTTGTGGAGTAGCGGTTGCATTCTTGCAGAGTTGTTTGCTGGGAAGCCCATCATGCCAGGAAGAACAGAGGTGGAGCAATTGCATAAGATTTTTAAACTTTGCGGGTCCCCTTCTGAGGAGTACTGGAAGAGATCAAGATTACCTCATGCAACCCTCTTTAAACCTCAACATCCTTATAAACGTTGTGTTTCTGAAACATTTAAGGACTTTCCTTCATCAGCCCTCGCCCTTTTAGACGTTCTTCTTGCTATAGAACCCAACAGTCGTGGAACAGCTTCTTCTGCTCTCCAAAATGAGTTCTTCACAACGAATCCACTTCCATGTGACCCATCAAGTTTGCCAAAGTATCCTCCAAGCAAGGAGTTCGATGCCAAGATTCGAGACGAGGAAGGCAGAAGACAAAGAGCGGGTCTGGGAGTAGGACGTGAGCATGAAACAGCTAGAAAAGGATTCAAAGAATCTAAAGCGGTTCCTGCACCAGATGCCAATGCTGAATTGCAAGCATCTATACTGAAACGACAAGCCCAAGCTAACCCGAAGAGCGTGAGCGAGAAGTTCAACCCAGAAGAAGACAGTGGGTCTGGATTCCCCATAGAACCTCCCAAAGAACTACCATTACATGTGCACTCCCACTCCAGCCAATCAATGCACCCTTCTGTGTTCGGATCTTCACGAAACATGAACATGAACAAGGGTAAAGAATCCAAAATACAGAGATCTTTCATCCAATGTGGGGCGGCCCAGCTGTCCCGGTTTTCCAATTCGGTCGCTGCTCAAGATGGGTCCCGCCGGTTCGGTATTGGTGGAGGAGGAGGAGATGCTTCTAGTATGAACTCTGACTGGTCCGGTCAGCGTTATAAAAACGGAAAATATAACCATTTGGATGGAGGTGAGTCATCTGGAAAGCATGAGTGGTCCCAACATTGTCCGAACATGGTCAAATCTAGTAAGGTTAAGAGGGATGAGTCCATAGCATCTGGAAAGGAGTCCACAATGAATAGAATACATTACTCGGGCCCACTGATGCCACCTGGCGGAAACCTAGATCAAATGCTGAAGGAGCATGAGAGACAGATCCAGCAAGCTGTCCGTAAAGCTCATGGGGATAAAACAAAGGCTAAAACGGCTTATAGTGATAATGGACAATACGAATCTTTACTTCACCATGGTAGGAATGGAAGGTGA 2208 44.57 MPLKLLPSELFVWLRKTSECVKVEIFLMGCICSKGGSTDEDHGKEKQLKSNKSSRQLGASLRKEEVIVDGDGGGNEATVRLIENRGSTQISDDDNEEKGSKLQIEKSQSTIERPSLSRISNFSNGEKGAQVVAGWPSWLTSVAGEAINGWLPRKAESFEKLDKIGQGTYSSVYRARDLETCKMVALKKVRFANMDPESVRFMAREIMILRRLDHPNVMKLEGLITSRVSGSLYLIFEYMEHDLAGLAANPAIKFTEAQIKCFMRQLLLGLEHCHILGVLHRDIKGSNLLIDNNGNLKIGDFGLATFLRPHQKQPLTSRVVTLWYRPPELLLGSTDYGVSVDLWSSGCILAELFAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKRSRLPHATLFKPQHPYKRCVSETFKDFPSSALALLDVLLAIEPNSRGTASSALQNEFFTTNPLPCDPSSLPKYPPSKEFDAKIRDEEGRRQRAGLGVGREHETARKGFKESKAVPAPDANAELQASILKRQAQANPKSVSEKFNPEEDSGSGFPIEPPKELPLHVHSHSSQSMHPSVFGSSRNMNMNKGKESKIQRSFIQCGAAQLSRFSNSVAAQDGSRRFGIGGGGGDASSMNSDWSGQRYKNGKYNHLDGGESSGKHEWSQHCPNMVKSSKVKRDESIASGKESTMNRIHYSGPLMPPGGNLDQMLKEHERQIQQAVRKAHGDKTKAKTAYSDNGQYESLLHHGRNGR 735
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 6806189 6810650 - Conep13aG0071100.1 Cone13ag0687 451074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag0687 735 MobiDBLite consensus disorder prediction 87 103 - -
Cone13ag0687 735 MobiDBLite consensus disorder prediction 515 562 - -
Cone13ag0687 735 FunFam probable serine/threonine-protein kinase At1g54610 241 481 - -
Cone13ag0687 735 MobiDBLite consensus disorder prediction 84 109 - -
Cone13ag0687 735 ProSitePatterns Protein kinases ATP-binding region signature. 164 187 IPR017441 GO:0005524(InterPro)
Cone13ag0687 735 Gene3D Phosphorylase Kinase; domain 1 145 240 - -
Cone13ag0687 735 MobiDBLite consensus disorder prediction 37 51 - -
Cone13ag0687 735 MobiDBLite consensus disorder prediction 461 496 - -
Cone13ag0687 735 MobiDBLite consensus disorder prediction 461 501 - -
Cone13ag0687 735 SUPERFAMILY Protein kinase-like (PK-like) 153 450 IPR011009 -
Cone13ag0687 735 ProSiteProfiles Protein kinase domain profile. 158 442 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone13ag0687 735 MobiDBLite consensus disorder prediction 705 735 - -
Cone13ag0687 735 Pfam Protein kinase domain 158 442 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone13ag0687 735 ProSitePatterns Serine/Threonine protein kinases active-site signature. 278 290 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone13ag0687 735 Gene3D Transferase(Phosphotransferase) domain 1 241 480 - -
Cone13ag0687 735 SMART serkin_6 158 442 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone13ag0687 735 FunFam probable serine/threonine-protein kinase At1g54610 145 240 - -
Cone13ag0687 735 PANTHER CELL DIVISION PROTEIN KINASE 157 442 IPR050108 GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER)
Cone13ag0687 735 MobiDBLite consensus disorder prediction 36 57 - -
Cone13ag0687 735 CDD STKc_CDK9_like 158 442 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0687 Cone-Chr13:6806189 Cone6ag0146 Cone-Chr6:740829 1.20E-236 dispersed
Cone13ag0687 Cone-Chr13:6806189 Cone19ag0681 Cone-Chr19:5761303 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82025 PF07647 SAM_2 8.80E-12 CL0003 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag0687 - - - 0.0