Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag0703 ATGGGCGATGTGACTGATAGTCAGCTGCAGCTCTACTCCTACTTCAGAAGCTCTTGCGCTTATCGTGTTCGAATTGCTCTCAACCTCAAAGGGTTGAAGTATGAGTACAAACCAGTCGATCTGCTCAAGGGAGAGCAATTCAGTCCAGAGTTCACGAAGCTCAATCCTATTGGTTATGTGCCCGTACTCGTCGATGGAGATATAGTTCTGGCTGATTCTTTTGCCATCTTAATGTATCTGGAAGAAAAGTTTCCTCAGCATCCATTACTGCCTTCTGATCTTCACAAAAGGGCTATCAATTACCAGGTCGCAAATATTGTTTGCTCAAGCATACAGCCTCTTCAGAATCTAGTCGTCCTGAAGTACATAGGAGAAAAAGTTGGCCCAGATGAGAAAATTCCTTGGGCTCAACAGCATATCGAAAAAGGATTTGCAGCTCTTGAAAAGCTGCTTAAAGATCATGCTGGAAGATACGCAACTGGAGATGAAGTTTACTTGGCAGATATATTTCTGGCGCCGCAGATTTATGGATCAGTAAGGTTCAATGTTGATCTGTCTCAGTTCCCTCTTTTATCCAGATTGAATGATGCTTATGCGGATGTACCGGCATTTCAAGATGCTAAACCCGAAAAGCAGCCTGATTTTCCAGGAATCAGTAGCTGA 663 43.44 MGDVTDSQLQLYSYFRSSCAYRVRIALNLKGLKYEYKPVDLLKGEQFSPEFTKLNPIGYVPVLVDGDIVLADSFAILMYLEEKFPQHPLLPSDLHKRAINYQVANIVCSSIQPLQNLVVLKYIGEKVGPDEKIPWAQQHIEKGFAALEKLLKDHAGRYATGDEVYLADIFLAPQIYGSVRFNVDLSQFPLLSRLNDAYADVPAFQDAKPEKQPDFPGISS 220
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 6898874 6900744 - Conep13aG0072700.1 Cone13ag0703 451090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag0703 220 FunFam Maleylacetoacetate isomerase 92 217 - -
Cone13ag0703 220 NCBIfam maleylacetoacetate isomerase 10 215 IPR005955 GO:0003824(InterPro)|GO:0005737(InterPro)|GO:0009072(InterPro)
Cone13ag0703 220 Gene3D - 92 217 - -
Cone13ag0703 220 SUPERFAMILY Thioredoxin-like 5 91 IPR036249 -
Cone13ag0703 220 Pfam Glutathione S-transferase, C-terminal domain 136 176 - -
Cone13ag0703 220 Gene3D Glutaredoxin 6 91 - -
Cone13ag0703 220 CDD GST_N_Zeta 9 81 IPR034333 -
Cone13ag0703 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 93 217 IPR010987 -
Cone13ag0703 220 FunFam Glutathione S-transferase Z1 7 91 - -
Cone13ag0703 220 SFLD Glutathione Transferase (cytosolic) 9 192 IPR040079 -
Cone13ag0703 220 PANTHER MALEYLACETOACETATE ISOMERASE 7 215 - GO:0004364(PANTHER)|GO:0006559(PANTHER)|GO:0006749(PANTHER)|GO:0016034(PANTHER)
Cone13ag0703 220 CDD GST_C_Zeta 94 212 IPR034330 -
Cone13ag0703 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 7 88 IPR004045 -
Cone13ag0703 220 SUPERFAMILY GST C-terminal domain-like 88 216 IPR036282 -
Cone13ag0703 220 Pfam Glutathione S-transferase, N-terminal domain 8 81 IPR004045 -
Cone13ag0703 220 SFLD Main (cytGST) 9 192 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0703 Cone-Chr13:6898874 Cone15ag0330 Cone-Chr15:1519689 6.50E-77 dispersed
Cone13ag0703 Cone-Chr13:6898874 Cone19ag0698 Cone-Chr19:5839617 4.27E-143 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag0703 K01800 - mdm:103416341 337.806