Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag0744 ATGACCAAGTCCAACTCATTTCTTCAGAATCTAATGAAACCCTTCAAAATGGGCTCAAGCAGAGAGAGCCAAAATGATGAAGATTTAGAGAGGATTGCTGCGCAGGAACAGAAAGTCTTTCCTTATGAAACCCTAGTTGCAGCTACTAAAGATTTTCATCCCAATCACAAGCTCGGAGAAGGTGGGTTTGGACCCGTTTTCAAGGGTAAGTTATTGGATGGAAGAGATATTGCGGTAAAGAAGTTATCACAATCTTCAAGTCAAGGAAAGAAAGAGTTTAAGAATGAGGCGAAGTTATTGTCCCGAGTGCAGCACCGGAATATCGTGAATCTTTTGGGATATTGTGCCCATGGAGCAGAGAAGCTGCTCGTCTATGAATATGTCACTAATGAAAGCGTTGACAAGTTCCTCTTTAAACAAAATAGGCGCGAGGAGCTTGATTGGAAACGTAGATACAACATAATATGCGGAATTGCGAGGGGCTTGCTTTATCTTCATGAAGACTCGCACAATCCCATCATCCACCGTGACATCAAGGCCAGCAACATTTTACTCGATGACAAGTGGGCCCCGAAAATCGCTGATTTTGGCATGGCCCGCCTCTTTCCCGAAGATGAGACACATGTCAACACCCGAGTGGCTGGTACTAATGGCTATATGGCTCCAGAATATGTAATGCATGGATACTTATCAGTCAAAGCCGACGTTTTTAGCTTTGGAGTCTTGGTTCTAGAACTGATAAGTGGTCAGAGAAACTCTTCCTTCAGTTCATACGAAGATGCACAGAATCTGCTCGATTGGGCATACAAGCTGTACAAGAAAGGCAAAAGCTTGGATATTATGGACCCAAAATTGGCACAATCGGCTCAGACTGAACAGGTAGCAACGTGCATACAGATAGGACTGCTTTGCGCACAGGGCGACCCGCATCAACGGCCCACCATGGGACGAGTTGTTGTTATGATGTCGAAGAAACCAAGCCATTTAGATGAACCGGGTAGGCCGGGGATACCTGGCTCGAGATATAGAAGGTCCCGGAGAGCACCAACTAAGAGCGGTAGTACTGGAAGCGCTGGTGACTCTTATTACAATACGACGTCTGATTTGAGCAGCACCAATACTAACACGGGAACCGTAACTGTAACTGCAACCACAACCGCAACGGGGACGAGCTCGACTAGCCGTGGGAGGACGGAGAATACCTCGACTAGCCGTGGGAGGATAGATAATCGTGGGAAGCAGCCTGTAGAAAGTTAA 1257 46.38 MTKSNSFLQNLMKPFKMGSSRESQNDEDLERIAAQEQKVFPYETLVAATKDFHPNHKLGEGGFGPVFKGKLLDGRDIAVKKLSQSSSQGKKEFKNEAKLLSRVQHRNIVNLLGYCAHGAEKLLVYEYVTNESVDKFLFKQNRREELDWKRRYNIICGIARGLLYLHEDSHNPIIHRDIKASNILLDDKWAPKIADFGMARLFPEDETHVNTRVAGTNGYMAPEYVMHGYLSVKADVFSFGVLVLELISGQRNSSFSSYEDAQNLLDWAYKLYKKGKSLDIMDPKLAQSAQTEQVATCIQIGLLCAQGDPHQRPTMGRVVVMMSKKPSHLDEPGRPGIPGSRYRRSRRAPTKSGSTGSAGDSYYNTTSDLSSTNTNTGTVTVTATTTATGTSSTSRGRTENTSTSRGRIDNRGKQPVES 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 7090410 7092466 + Conep13aG0076800.1 Cone13ag0744 451131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag0744 418 SUPERFAMILY Protein kinase-like (PK-like) 37 330 IPR011009 -
Cone13ag0744 418 Gene3D Transferase(Phosphotransferase) domain 1 128 331 - -
Cone13ag0744 418 MobiDBLite consensus disorder prediction 1 19 - -
Cone13ag0744 418 MobiDBLite consensus disorder prediction 349 401 - -
Cone13ag0744 418 MobiDBLite consensus disorder prediction 324 418 - -
Cone13ag0744 418 Gene3D Phosphorylase Kinase; domain 1 15 127 - -
Cone13ag0744 418 ProSiteProfiles Protein kinase domain profile. 52 329 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone13ag0744 418 MobiDBLite consensus disorder prediction 402 418 - -
Cone13ag0744 418 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 36 336 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cone13ag0744 418 FunFam Cysteine-rich receptor-like protein kinase 10 129 334 - -
Cone13ag0744 418 SMART serkin_6 52 322 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone13ag0744 418 Pfam Protein tyrosine and serine/threonine kinase 55 319 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone13ag0744 418 CDD STKc_IRAK 58 324 - -
Cone13ag0744 418 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone13ag0744 418 MobiDBLite consensus disorder prediction 1 27 - -
Cone13ag0744 418 FunFam Cysteine-rich receptor-like protein kinase 10 16 127 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0744 Cone-Chr13:7090410 Cone9ag1065 Cone-Chr9:5949046 2.56E-107 dispersed
Cone11ag0223 Cone-Chr11:1101542 Cone13ag0744 Cone-Chr13:7090410 2.17E-101 transposed
Cone13ag0744 Cone-Chr13:7090410 Cone19ag0750 Cone-Chr19:6126358 5.11E-233 wgd
Cone13ag0744 Cone-Chr13:7090410 Cone6ag0386 Cone-Chr6:1878713 1.93E-151 wgd
Cone13ag0744 Cone-Chr13:7090410 Cone9ag0413 Cone-Chr9:1912445 1.26E-155 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82026 PF00022 Actin 1.50E-130 CL0108 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag0744 - - - 0.0