Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag0763 ATGGAAGGCTTTCGTCGCTGGTTCAACCGCCGCTCTACCACTTCCTCATCTTCTTCTACTGATTCCGCCGTTAATTACATCGATACTGCTACTACTACTACTACCACTAATGGCCGCGGTGATGTTCGAAACGGGAGTCCATCAAAAGCTGTCAGATCAAACGAGCTGGAGATCACTGTAGATTTCGACATTTCAGGGTTGAAGCCTATTGTGGTCCCTAAAAGGACCGATCACTGTAGTAATATCGCATCCATGGGTCCTCCTCATAAGAACATGCTTGACAAAGATTTTTTCACAGAATATGGGGAGGCAAGCCGATACGAAATCTACCAAGTAATAGGCAAAGGCAGCTATGGAGTTGTTGCATCAGCCATAGACACTCATTCAGGCGAGAAAGTAGCTATTAAGAAAATAAATGATGTCTTTGAGCATGTTTCTGATGCGACAAGAATCCTCAGAGAAATCAAGCTCCTTAGGTTGCTCAATCACCCGGACATTGTTCAAATCAAACATATAATGCTTCCTCCGTCTAGAAGAGAGTTTGAAGATATCTATGTTGTGTTTGAGTTGATGGAATCTGATCTTCACCAAGTCATTAAGGCAAACCATGACCTCACTCATGAACATTTCCAGTTCTTCTTGTATCAGCTTCTTCGTGCTTTGAAATATATACATGCAGCAAATGTATTCCACAGAGATTTAAAGCCAAAAAACATACTGGTTAATTCGGACTGCAAATTGAAGATATGTGATTTTGGGCTTGCTCGTGCAGCGTTTAATGATGCTCCGTCTACCGTTTTCTGGACTGATTATGTGGCAACTAGATGGTATCGTGCCCCTGAACTTTGTGGTTCTTTCTTCTCCAAGTACACACCTGCTATTGACATTTGGAGCATAGGATGTATATTTGCAGAAATGCTGACTGGAAAACCCTTGTTTCCCGGAAAAACAGTTGTCCATCAACTTGACCTGATCACGGATTTTCTTGGCACCCCTTCTCCTGAATCTGTGGCTAAGATTCGGAATGAAAAAGCTAAAAGGTATTTGAATAGTATGAGGAAAAAGCAACCTATTCCTCTCTCGGAAAAGTTCCCCAATGCAGAGCCATTGGCTCTTCGTATACTTGGACGCCTGCTTGCATTTGACCCGAAGGACCGTCCATCCGCTGGCGAGGCATTAGCTGATCCATATTTCCATGGATTGGCGAACGTCAATTATGAACCGTCCAGACAACAAATATCAAAACTGGAATTTGAGTTTGAGAGAAGGCAGTTGAGACAAGACGACGTTCGAGAGCTTATCTATAGAGAGATCCTAGAGTATCATCCTCAGATGCTAGAAGAGTACCTTGAGGGATCAGAGAGCTCATTCATGTATCCAAGCGGAGTTGATCGGTTTAAGCATCAATTTGCTCATCTTGAGGAAAAAAAGCATGGGAAAGGGGAAAGAAGCTCTTTACTTCAGAGAAAGCATGCCTCCTTGCCCAGGGAGCGAGTTTGCATGCCAAAAGAAGTGGATGTAGACCAAAATAGTCACTGTGAAGAGTGCTAA 1551 43.13 MEGFRRWFNRRSTTSSSSSTDSAVNYIDTATTTTTTNGRGDVRNGSPSKAVRSNELEITVDFDISGLKPIVVPKRTDHCSNIASMGPPHKNMLDKDFFTEYGEASRYEIYQVIGKGSYGVVASAIDTHSGEKVAIKKINDVFEHVSDATRILREIKLLRLLNHPDIVQIKHIMLPPSRREFEDIYVVFELMESDLHQVIKANHDLTHEHFQFFLYQLLRALKYIHAANVFHRDLKPKNILVNSDCKLKICDFGLARAAFNDAPSTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKTVVHQLDLITDFLGTPSPESVAKIRNEKAKRYLNSMRKKQPIPLSEKFPNAEPLALRILGRLLAFDPKDRPSAGEALADPYFHGLANVNYEPSRQQISKLEFEFERRQLRQDDVRELIYREILEYHPQMLEEYLEGSESSFMYPSGVDRFKHQFAHLEEKKHGKGERSSLLQRKHASLPRERVCMPKEVDVDQNSHCEEC 516
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 7194257 7197768 + Conep13aG0078800.1 Cone13ag0763 451150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag0763 516 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone13ag0763 516 Pfam Protein kinase domain 107 398 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone13ag0763 516 ProSitePatterns Protein kinases ATP-binding region signature. 113 137 IPR017441 GO:0005524(InterPro)
Cone13ag0763 516 SMART serkin_6 107 398 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone13ag0763 516 FunFam Mitogen-activated protein kinase 95 201 - -
Cone13ag0763 516 Gene3D Transferase(Phosphotransferase) domain 1 193 421 - -
Cone13ag0763 516 CDD STKc_TDY_MAPK 106 443 - -
Cone13ag0763 516 ProSiteProfiles Protein kinase domain profile. 107 398 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone13ag0763 516 SUPERFAMILY Protein kinase-like (PK-like) 103 404 IPR011009 -
Cone13ag0763 516 ProSitePatterns MAP kinase signature. 142 245 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone13ag0763 516 MobiDBLite consensus disorder prediction 8 22 - -
Cone13ag0763 516 Gene3D Phosphorylase Kinase; domain 1 123 444 - -
Cone13ag0763 516 MobiDBLite consensus disorder prediction 30 49 - -
Cone13ag0763 516 FunFam Mitogen-activated protein kinase 193 421 - -
Cone13ag0763 516 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 104 439 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Cone13ag0763 516 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0763 Cone-Chr13:7194257 Cone2ag0757 Cone-Chr2:33377398 1.39E-240 dispersed
Cone1ag0936 Cone-Chr1:54707641 Cone13ag0763 Cone-Chr13:7194257 2.31E-28 dispersed
Cone5ag0644 Cone-Chr5:2747627 Cone13ag0763 Cone-Chr13:7194257 1.32E-26 dispersed
Cone13ag0763 Cone-Chr13:7194257 Cone19ag0767 Cone-Chr19:6232714 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82027 PF07714 PK_Tyr_Ser-Thr 9.80E-35 CL0016 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag0763 - - - 0.0