Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag0811 ATGGGGTCAAGAGAAGGAGGTCGGCGTCATCATAATCTGGTACCTCTTGCTGCTTTGATTAGTAAAGAGATGAAGTCTGAGAGGATGGAGAAGCCCACTGTAAGATATGGTAGTGCTGCTCAGTCTAAGAAAGGCGAGGATTATTTCCTCGTTAAAACTGATTGTCTAAGGGTTCCTGGAAATTCTTCATCCAGCTTTTGTGTATTTGCGATATTTGATGGGCATAATGGGAAAGCTGCAGCTGTTTTTACACGAGAAAATTTGTTGAGTCATGTACTTGGAGCTATTCCTCGTGGCCTCGGAAGGGAGGAGTGGCTTCAAGCTTTACCTCGAGCATTGGTTGCTGGATTTGTGAAAACAGACAAGGAATTCCAGAGCAGAGGGGAAACTTCTGGAACCACGGCAACATTTGTTATAGTTGATGGATGGACTGTTACAGTAGCATCAGTTGGAGATTCTCGTTGTATTCTAGACATTCAAGGTAGTGCTGTTTCCACATTAACTGTTGATCATAGACTCGAAGAAAATGCTGAGGAGAGGGAACGGGTTACTGCAAGCGGGGGGGAAGTTGGAAGGCTTAGCATTGTGGGTGGCGCAGAGATTGGTCCTCTACGTTGTTGGCCAGGGGGTTTATGTCTTTCTAGATCCATAGGGGATATGGATGTTGGAGAGTTCATTGTTCCAATACCCTATGTTAAACAAGTCAAGCTATCAAACAATGGAGGAAGGCTTATAATTGCTTCTGACGGAATTTGGGACTCACTACCTTCAGAAATGGCTGCAAAATCCTGCCGTGGATTACCAGCAGAACTTGCTGCTAGACAAGTTGTCAAGGAAGTGCTAAGGTCAAAAGGGTTAAAGGACGACACGACCTGCATAATTGTTGACATAATCCCGCCTGAAATTCCACCCCAGCATCTTCCTCCGCCCCCTCCGAAAAAGCCCAACAGACTGAAATCCCTGTTTTTCCGTAAGAAATCTTGTGATTCTGCTAATAAGCTTTCGAAGAGGCTTTCAGCTGTAGGGATAGTAGAGGAGTTATTCGAAGAAGGCTCGGCAATGCTTGCAGAGAGGCTTGGAAGTGATGAGTTGACTGGGCAGTCAACTTCCGGACTGTTTGTTTGTGCTGTGTGCCAAGTAGACCTTGCTCCGAGCGAGGGCATCTCAGTTCATGCGGGGTCCATCTTCTCGATGAGTTCAAAGCCGTGGCAAGGACCGTTCCTTTGTACGGATTGTAGGAACAAGAAGGATGCCATGGAAGGGAAACGCCCGAGCGGCATTAAAGTGGTTTAG 1293 46.48 MGSREGGRRHHNLVPLAALISKEMKSERMEKPTVRYGSAAQSKKGEDYFLVKTDCLRVPGNSSSSFCVFAIFDGHNGKAAAVFTRENLLSHVLGAIPRGLGREEWLQALPRALVAGFVKTDKEFQSRGETSGTTATFVIVDGWTVTVASVGDSRCILDIQGSAVSTLTVDHRLEENAEERERVTASGGEVGRLSIVGGAEIGPLRCWPGGLCLSRSIGDMDVGEFIVPIPYVKQVKLSNNGGRLIIASDGIWDSLPSEMAAKSCRGLPAELAARQVVKEVLRSKGLKDDTTCIIVDIIPPEIPPQHLPPPPPKKPNRLKSLFFRKKSCDSANKLSKRLSAVGIVEELFEEGSAMLAERLGSDELTGQSTSGLFVCAVCQVDLAPSEGISVHAGSIFSMSSKPWQGPFLCTDCRNKKDAMEGKRPSGIKVV 430
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 7450088 7453330 + Conep13aG0083700.1 Cone13ag0811 451198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag0811 430 Pfam Protein phosphatase 2C 61 266 IPR001932 -
Cone13ag0811 430 Gene3D - 33 301 IPR036457 -
Cone13ag0811 430 ProSiteProfiles PPM-type phosphatase domain profile. 28 297 IPR001932 -
Cone13ag0811 430 FunFam probable protein phosphatase 2C 5 35 302 - -
Cone13ag0811 430 SMART PP2C_SIG_2 51 297 IPR001932 -
Cone13ag0811 430 SUPERFAMILY PP2C-like 34 297 IPR036457 -
Cone13ag0811 430 SMART PP2C_4 25 295 IPR001932 -
Cone13ag0811 430 PANTHER PROTEIN PHOSPHATASE 27 296 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cone13ag0811 430 CDD PP2Cc 43 297 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0811 Cone-Chr13:7450088 Cone1ag1537 Cone-Chr1:57335055 3.13E-212 dispersed
Cone13ag0811 Cone-Chr13:7450088 Cone19ag0817 Cone-Chr19:6502440 2.80E-291 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag0811 - - - 0.0