Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone13ag0829 | ATGAGGATGAGTTGCAATGGCTGCAGAGTTCTCCGCAAAGGCTGCACCGATGACTGTGTCATCCGACCCTGCCTCCACTGGCTTCCGTCCTCTGATTATCAAGCCAACGCCACCCTTTTCCTCGCCAAGTTCTATGGCCGTGCTGGCCTCCTCAACCTCCTCACCGCAGGCCCCGAATACCGTCGTCCCGAGATTTTCAAGTCACTGCTACATGAGGCTTGTGGGCGGATCGTGAATCCGGTTTACGGTGCTTTGGGTTTGCTCTCGGCTGGAAAGTGGGACCGATGTCAATCTGCGGTTGATGCGGTGATCATGGGACTGACAATCACGGCTGACGACAACATTGACGACGATGCACCTTCACCGCAAGCTAACTTTTTTCTCAGAAACGGAGACATTCGCCATGCGATGAAGGAGGTCGGCTTGGCTAATAAGACTCCGAACAAGAAGGCGAGACGGTCTCGAGCTACGTTGGGTGATGATGTGGCTGGCTCTGGTAATACTGGGTGGGCCTGGCTTTCCCCTGAGGATTTCATTCGGGGCATGACATTGGGGATGGGCCGAAATCAAGAAGAGACCATGCTTTTTGCTGAAACCATGGGGGATGCATTAGCCAACCGGTGCAAGCCGGACCGTGTCTTAAAGTTATTCGACGATGGGTTGGACTTGACTCTTGGATAG | 681 | 53.89 | MRMSCNGCRVLRKGCTDDCVIRPCLHWLPSSDYQANATLFLAKFYGRAGLLNLLTAGPEYRRPEIFKSLLHEACGRIVNPVYGALGLLSAGKWDRCQSAVDAVIMGLTITADDNIDDDAPSPQANFFLRNGDIRHAMKEVGLANKTPNKKARRSRATLGDDVAGSGNTGWAWLSPEDFIRGMTLGMGRNQEETMLFAETMGDALANRCKPDRVLKLFDDGLDLTLG | 226 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 7525201 | 7526001 | + | Conep13aG0085500.1 | Cone13ag0829 | 451216 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone13ag0829 | 226 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 38 | 1 | 153 | - | GO:0010468(PANTHER) | |
Cone13ag0829 | 226 | ProSiteProfiles | LOB domain profile. | 3 | 109 | IPR004883 | - | |
Cone13ag0829 | 226 | Pfam | Lateral organ boundaries (LOB) domain | 4 | 101 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone13ag0829 | Cone-Chr13:7525201 | Cone19ag0280 | Cone-Chr19:2004222 | 1.20E-52 | dispersed | |
Cone11ag0317 | Cone-Chr11:1550023 | Cone13ag0829 | Cone-Chr13:7525201 | 3.50E-52 | wgd | |
Cone13ag0829 | Cone-Chr13:7525201 | Cone19ag0834 | Cone-Chr19:6592100 | 7.08E-147 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
44636 | PF07479 | NAD_Gly3P_dh_C | 2.20E-24 | CL0106 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone13ag0829 | - | - | - | 0.0 |