Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag0871 ATGGGGAATAATGGAAGAAAAATGAAGCTTCATTTCAGCAAGATCTACTCAATCGCATGTGGAGGTAAAGGGTCAGTAAAGGATGACCATTCACATATAGGCGGACTGGGTTTTTCCCGGGTTGTTTTCTGCAACGAACCGGAGTCCTTCGAGGCCGGAATCCGGGACTATGCAGATAATTATGTCAGTACCACAAAGTATACGCTTGCTACTTTCTTGCCCAAATCCCTGTTTGAGCAATTTAGAAGAGTGGCTAATTTCTACTTCTTGGTTAGTGGTATTTTGTCCTTCACCCCTCTTGCTCCTTATTCTGCTGTTAGTGCTATTCTCCCTCTTCTCTTTGTCATGGCGGTTTCAATGACCAAAGAAGCTATCGAGGATTGGCGCCGTAAAAAGCAGGATGTTGAGGTGAACAATAGAAAAGTTAAGGTGCATAGAGGCAATGGAATCTTCAAGCAAACCGAATGGAGGAATCTTCGTGTGGGCGATATCGTAAAAGTGGAAAAAGACCAATTCTTCCCGGCCGACCTCCTCTTGCTTTCATCTAGTTACGAGGATGCAGTTTGCTATGTTGAAACAATGAACCTTGATGGTGAGACCAATTTGAAGCTCAAACAAGGATTAGAGGTAACTTCATTTGCGCATGAGGACGCTAACTTCCGCGATTTTAGAGCTATGGTAAAATGCGAGGACCCGAATGCAAATTTATACACTTTTGTCGGAAATTTAGAGACCGAAGAAAGGCAATACCCACTTTCTCCTCAACAGCTACTCCTAAGAGACTCAAAACTCCGTAACACGGACTTTATATTTGGGGCCGTCATTTTCACTGGTAGGGACACCAAGGTTATTCAAAATTCTACGGATCCACCTTCCAAGAGAAGTAAAGTTGAGAAGAAGATGGATAGAATCATCTACTTCCTTTTCGGAGTCCTATTCTTACTTGCTCTTATTGGATCTATATACTTTGGAGTTGTGACTAATGATGATATAAAGAACGGGAAAATGAAGAGGTGGTATCTTAGGCCGGATGATACCACAGTTTTCTACGACCCGAATAGGGTCGCCCTTGCAAGTTTTTTACATTTTCTTACAGCTCTAATGCTGTATAACTACTTTATCCCCATATCCTTATATGTGTCTATAGAAATCGTCAAGGTTCTTCAGAGCATATTTATCAATCAAGATATTAACATGTACTATGAAGATGCGGACAAGCCGGCACATGCTAGGACCTCTAATTTAAATGAGGAGCTTGGTCAAGTGGACACAGTTCTTTCTGATAAGACTGGAACTTTGACCTGCAATTCAATGGAGTTTATCAAGTGTTCTGTGGCTGGTAGAGCTTATGGCCGTGGCATTACAGAGGTTGAAAGAGCTATGAATCGGAAAAACGAGTCTTCCCCATTGATTCATCCGAATGGGTTGGGTAGTACTAATGAGGATGTTTCCAGTCCTGCAAACCTGTTGATCAAAGGGTTTAATTTTAAGGATGAAAGAATAATGAAAGGGAATTGGGTATATGAGCCTAATAAGGATCTTATTCGGATGTTTTTTCATCTACTTGCAACTTGTCATACAGCTATTCCGGAAGTTGATGAAGACTCTGGAAAGGTTTCTTACGAGGCTGAATCCCCAGATGAAGCCGCATTTGTAATTGCGGCTAGGGAAATTGGTTTTGAATTTTATAGACGGACCCAAACAAGCATTTCCATCAAGGAGTTAGATCCCATTTCTGGTGAAAAAGTCGAAAGGACATATAAGTTGTTGCATGTTCTGGAGTTTAATAGCACGAGGAAGAGGATGTCTGTCATAGTAAAAAATGAAGAGGGGAAGATACTGTTGTTTTCTAAAGGAGCTGACAATGTGATGTTTGAGAGGCTTTCTACAGACAGTAGTGAATTTGAAAAGAAGACCAAGAAGCATGTAAGCGAATATGCAGATGCCGGTTTAAGGACCTTGGTACTTGCCTATAGGGAGGTAGATGAGGATGAATATAATGAGTTTGATGAGAAATTCACAAAGGCGAAGAACTTGATTAGTGCAGATAGAGATTCCTTGATTGAGGAACTGACTGAAAAGATTGAAAAGGATTTGTTTCTTCTCGGTGCCACTGCTGTTGAGGACAAGCTCCAAAACGGGGTTCCGGATTGTATTGACAAGCTTGCCCAAGCCGGAATTAAGATCTGGGTCTTGACTGGGGATAAGATGGAGACTGCCATCAATATCGGATTTGCTTGTAGTTTGCTTAGGCAAGGAATGGAGCAGATAACTATCACTCTAGATAGTCAGGAAATTCAAGCCCTGGAGAAGACCCAGGAAAAGTCAATCATAACAAAGGCGTCAAAGGAAAGTGTGGTTCATCAAATCACTCGAGGAAAAGATCAGATCAATTCATCAAGAGGACGCAACGAGGCATTTGCTTTGATCATTGATGGAAAATCACTTGCCTACGCTTTGGAAGATGATGTAAAGAATCTCTTCCTAGAGCTTGCAATTGATTGTGCATCTGTTATTTGCTGCAGATCGTCTCCTAAACAGAAAGCACTGGTTACAAGACTAGTTAAAACCGGAACCGGAAAAACAACGTTAGCAATTGGTGATGGGGCCAATGATGTTGGAATGCTTCAAGAAGCCGATATTGGTATTGGAATTAGCGGTGCTGAAGGAATGCAGGCTGTTATGTCGAGTGATATTGCAATTGCACAGTTTAGATATTTGGAGCGCCTGTTACTTGTCCATGGACATTGGTGTTACCGAAGAATCACATCTATGATATGCTACTTCTTCTACAAGAACATAGCTTTTGGTTTCACCATCTTCTTATATGAGGCGTTCACAACATTCTCCGGACAACCTGCATATAACGATTGGTTCTTGTCGCTTTACAATGTCTTCTTTTCATCTCTTCCGGTAGTTGCTCTTGGGGTTTTCGACCAAGATGTATCCGCTAGATTCTGTCTCAAGTTTCCTCTACTATACCAACAAGGAGTACAAAACGCACTCTTCAGTTGGCGCCGAATCCTAAGCTGGATGGCAAATGGTTTATACAGCGCTGTAGTAATCTTCTTCCTCTGCACAAAAGCCTTTGAGCATCAAGCCTTTAACTCGACCGGAAAAACTGTCGGAAGAGACATCCTAGGTGCGACAATGTATTCATGTCTCGTCTGCATAGTAAACTTACAAATTGCACTTGCAATCAGTTACTTCACCTTGATCCAACACCTCTTCATCTGGGGCTCAATCGCAATCTGGTACCTATTCCTCGTCATTTATGGCTACATCACTCCCTCCTTCTCCACCAACGCCTACAAGATCTTTGTTGAGACTTTAGCCCCGACCCCTTCCTACTGGCTCCTGGTGATGTTTGTCATGCTTACAACTCTGATCCCATATTTCTCGTACTCTGCGCTTCGGGTGAGTTTCTTCCCAATGTATCACGAAATGATTCAATGGATAAGGCATAATGGGAAGGTAAATGATCCCGAGTATTGTGATGTGGTTAAGCAGACCACATTACGGTCGGCCAGTGTTGGTGTTTCTGCCCGGTTTGCTGCCCAGATACAACAGGTAGTAGGGGAAGTGGATAGCCAGTCGTGA 3600 42.42 MGNNGRKMKLHFSKIYSIACGGKGSVKDDHSHIGGLGFSRVVFCNEPESFEAGIRDYADNYVSTTKYTLATFLPKSLFEQFRRVANFYFLVSGILSFTPLAPYSAVSAILPLLFVMAVSMTKEAIEDWRRKKQDVEVNNRKVKVHRGNGIFKQTEWRNLRVGDIVKVEKDQFFPADLLLLSSSYEDAVCYVETMNLDGETNLKLKQGLEVTSFAHEDANFRDFRAMVKCEDPNANLYTFVGNLETEERQYPLSPQQLLLRDSKLRNTDFIFGAVIFTGRDTKVIQNSTDPPSKRSKVEKKMDRIIYFLFGVLFLLALIGSIYFGVVTNDDIKNGKMKRWYLRPDDTTVFYDPNRVALASFLHFLTALMLYNYFIPISLYVSIEIVKVLQSIFINQDINMYYEDADKPAHARTSNLNEELGQVDTVLSDKTGTLTCNSMEFIKCSVAGRAYGRGITEVERAMNRKNESSPLIHPNGLGSTNEDVSSPANLLIKGFNFKDERIMKGNWVYEPNKDLIRMFFHLLATCHTAIPEVDEDSGKVSYEAESPDEAAFVIAAREIGFEFYRRTQTSISIKELDPISGEKVERTYKLLHVLEFNSTRKRMSVIVKNEEGKILLFSKGADNVMFERLSTDSSEFEKKTKKHVSEYADAGLRTLVLAYREVDEDEYNEFDEKFTKAKNLISADRDSLIEELTEKIEKDLFLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMEQITITLDSQEIQALEKTQEKSIITKASKESVVHQITRGKDQINSSRGRNEAFALIIDGKSLAYALEDDVKNLFLELAIDCASVICCRSSPKQKALVTRLVKTGTGKTTLAIGDGANDVGMLQEADIGIGISGAEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRITSMICYFFYKNIAFGFTIFLYEAFTTFSGQPAYNDWFLSLYNVFFSSLPVVALGVFDQDVSARFCLKFPLLYQQGVQNALFSWRRILSWMANGLYSAVVIFFLCTKAFEHQAFNSTGKTVGRDILGATMYSCLVCIVNLQIALAISYFTLIQHLFIWGSIAIWYLFLVIYGYITPSFSTNAYKIFVETLAPTPSYWLLVMFVMLTTLIPYFSYSALRVSFFPMYHEMIQWIRHNGKVNDPEYCDVVKQTTLRSASVGVSARFAAQIQQVVGEVDSQS 1199
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 7765056 7770090 + Conep13aG0089800.1 Cone13ag0871 451258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag0871 1199 SUPERFAMILY Calcium ATPase, transduction domain A 139 285 IPR008250 -
Cone13ag0871 1199 NCBIfam HAD-IC family P-type ATPase 837 949 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cone13ag0871 1199 NCBIfam HAD-IC family P-type ATPase 108 215 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cone13ag0871 1199 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 494 670 IPR023299 GO:0000166(InterPro)
Cone13ag0871 1199 ProSitePatterns E1-E2 ATPases phosphorylation site. 428 434 IPR018303 -
Cone13ag0871 1199 SFLD Haloacid Dehalogenase 408 917 - -
Cone13ag0871 1199 FunFam Phospholipid-transporting ATPase 544 702 - -
Cone13ag0871 1199 CDD P-type_ATPase_APLT_Dnf-like 59 1026 - -
Cone13ag0871 1199 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 37 1145 - GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER)
Cone13ag0871 1199 SUPERFAMILY HAD-like 421 921 IPR036412 -
Cone13ag0871 1199 FunFam Phospholipid-transporting ATPase 118 288 - -
Cone13ag0871 1199 Gene3D - 556 676 IPR023299 GO:0000166(InterPro)
Cone13ag0871 1199 NCBIfam phospholipid-translocating P-type ATPase 57 1151 IPR006539 GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro)
Cone13ag0871 1199 SUPERFAMILY Calcium ATPase, transmembrane domain M 54 1143 IPR023298 -
Cone13ag0871 1199 SFLD p-type atpase 408 917 IPR044492 -
Cone13ag0871 1199 Pfam Phospholipid-translocating P-type ATPase C-terminal 894 1144 IPR032630 -
Cone13ag0871 1199 FunFam Phospholipid-transporting ATPase 702 906 - -
Cone13ag0871 1199 Gene3D - 116 288 - -
Cone13ag0871 1199 PRINTS P-type cation-transporting ATPase superfamily signature 866 885 - -
Cone13ag0871 1199 PRINTS P-type cation-transporting ATPase superfamily signature 426 440 - -
Cone13ag0871 1199 Pfam Phospholipid-translocating ATPase N-terminal 42 109 IPR032631 -
Cone13ag0871 1199 Gene3D - 699 906 IPR023214 -
Cone13ag0871 1199 Pfam Cation transport ATPase (P-type) 524 629 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0871 Cone-Chr13:7765056 Cone7ag1229 Cone-Chr7:9118286 0 dispersed
Cone2ag0731 Cone-Chr2:32974664 Cone13ag0871 Cone-Chr13:7765056 0 transposed
Cone13ag0871 Cone-Chr13:7765056 Cone19ag0872 Cone-Chr19:6833295 0 wgd
Cone13ag0871 Cone-Chr13:7765056 Cone6ag0484 Cone-Chr6:2412016 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag0871 K01530 - cit:102613579 1889.77