Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag0891 ATGGATGTCAGCATGATGAGCTTTTCACATGATATGGATAATGAATATGAGAAACTCATTAGAAGGATGAACCCTCCAATGGTTGTTATTGATAATGAAATCTGCAAGAATGCCACGGTTATAAGGGTGGATAGTGTAAACAAACACGGGATTCTTCTCGAAGTTGTTCAAGTTCTTGCTGATCTCAACCTCATAATAACTAAAGCTTACATATCCTCTGATGGCGGTTGGTTCATGGATGTTTTTAATGTCACCGATCAAGACGGAAACAAGGTCACGGATGAAGGAATTCTACACTACATAGAAAGATCTCTTGGCCCGGATTCGTGTTTTTCATCATCAATGAGATCGGTTGGTGTCAAATTCACTATAGATTACACAGTAATTGAGCTAACTGGAATGGATCGGCCTGGATTACTCTCTGAACTAAGTGCCATTCTAACTCACCTCAAATGCAACATAGTGAATGCTGAGGTTTGGACCCACAACTCTCGGGCTGCGGCTGTTGTCCACATCACTGATGTGGAAACAGGGTCTGCCATTACGGATCCCGAGCGACTCTCTAAAATCAAGGGATTACTATGCAATGTACTTAGAGGCAGCAACAACAAAACCCGGGGAGCTAAGACGGTGGTTTCGCATGGAGCCACTCACACGGAACGGAGGCTTCATCAGATGATGTTTGCTGATCGGGATTATGAGTGGGCCCACAATAACAATGATGTCATGTATGATAAGCAGAGGCCAAGTGTTGATGTTGTTAATTGGAAGGATAAGGATTACTCGGTTGTTACGATCCAAAGTAAGGACAGACCGAAGCTTTTGTTTGATACGGTTTTTACTTTGACGGATATGGGATATGTTGTTTTTCACGCGAATATTGATGCCGAAGGACTTGAAGCTTATCAGGAATACTTCATCCGGCATATTGATGGGTCACCCGTAAAATCCGAATCCGAGAGGCAAAGAGTTATACTATGTCTTGAAGCAGCTATTAGAAGAAGAGTCTCTGAGGGGTTGAAGCTTGAGTTATGCACAACGGATAGAGTTGGGCTACTATCTGATGTGACTAGAATCTTCCGGGAGAATAGCCTTACTGTTAGCCGAGCAGAAGTGACGACCAAATCGGGCAAGGCGGTAAACACGTTTTACGTTTGTGATGCTTCTGGATATCAGGTCGATTCTAAGACCATAAACTCAATAAGGGAAGCAATAGGGCAAACTATTCTTAAGGTGAAAGGTATTCCAGAGGAGATGATAAAACCCGTTTCTCAAGACTCTTCTCCGTCCCGCTTTCTCTTTGGCGGGCTCTTTAAATCCCGGTCTTTTGTGAGTTTTCGTTTGATCGGATTGTATTCTTGA 1362 43.1 MDVSMMSFSHDMDNEYEKLIRRMNPPMVVIDNEICKNATVIRVDSVNKHGILLEVVQVLADLNLIITKAYISSDGGWFMDVFNVTDQDGNKVTDEGILHYIERSLGPDSCFSSSMRSVGVKFTIDYTVIELTGMDRPGLLSELSAILTHLKCNIVNAEVWTHNSRAAAVVHITDVETGSAITDPERLSKIKGLLCNVLRGSNNKTRGAKTVVSHGATHTERRLHQMMFADRDYEWAHNNNDVMYDKQRPSVDVVNWKDKDYSVVTIQSKDRPKLLFDTVFTLTDMGYVVFHANIDAEGLEAYQEYFIRHIDGSPVKSESERQRVILCLEAAIRRRVSEGLKLELCTTDRVGLLSDVTRIFRENSLTVSRAEVTTKSGKAVNTFYVCDASGYQVDSKTINSIREAIGQTILKVKGIPEEMIKPVSQDSSPSRFLFGGLFKSRSFVSFRLIGLYS 453
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 7892887 7895420 + Conep13aG0091900.1 Cone13ag0891 451278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag0891 453 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 15 413 IPR040217 -
Cone13ag0891 453 ProSiteProfiles ACT domain profile. 40 120 IPR002912 -
Cone13ag0891 453 Pfam ACT domain 346 400 IPR002912 -
Cone13ag0891 453 Pfam ACT domain 127 179 IPR002912 -
Cone13ag0891 453 Pfam ACT domain 39 91 IPR002912 -
Cone13ag0891 453 CDD ACT_ACR_3 261 335 - -
Cone13ag0891 453 CDD ACT_ACR_2 127 200 - -
Cone13ag0891 453 Gene3D - 126 201 - -
Cone13ag0891 453 SUPERFAMILY ACT-like 35 100 IPR045865 -
Cone13ag0891 453 ProSiteProfiles ACT domain profile. 128 208 IPR002912 -
Cone13ag0891 453 SUPERFAMILY ACT-like 337 406 IPR045865 -
Cone13ag0891 453 ProSiteProfiles ACT domain profile. 341 417 IPR002912 -
Cone13ag0891 453 SUPERFAMILY ACT-like 125 199 IPR045865 -
Cone13ag0891 453 CDD ACT_ACR_1 38 107 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0891 Cone-Chr13:7892887 Cone16ag1007 Cone-Chr16:9824722 1.52E-174 dispersed
Cone13ag0891 Cone-Chr13:7892887 Cone19ag0890 Cone-Chr19:6964192 0.00E+00 wgd
Cone13ag0891 Cone-Chr13:7892887 Cone6ag0514 Cone-Chr6:2553284 1.13E-237 wgd
Cone13ag0891 Cone-Chr13:7892887 Cone9ag0526 Cone-Chr9:2511926 3.15E-172 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag0891 - - - 0.0