Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag0897 ATGCCAGAGCTAACGACGCTGTATTCCTTGCAAGAAGTCTGTCAGCACAATACCAAAGATGACTGCTGGATCGTCATTGATCGCAAGTTATATGATGTTTCATCCTATATGGACGAGCACCCTGGTGGAGATGATGTATTCCTTGATTCAACGGGCAAAGATGAAGCCGATGAATTTGAAGATACTGATCATAGCAAAGAAGCGAGAGAGCTCGACGATGATGGATCTTTCCTTGATATTTCCTCCGAGAAGAAGAAGAAGAAGCAGCATCCATCGAGTTATGCTCAGAAATTGAGAGACTTTACAGAGAAATGCTGGACTCTTCCTGTGGCTTTAGTTACCGTTTCTGTCATAGTGAGCTTCCTATACTTGCGTAGGACTTAA 384 43.23 MPELTTLYSLQEVCQHNTKDDCWIVIDRKLYDVSSYMDEHPGGDDVFLDSTGKDEADEFEDTDHSKEARELDDDGSFLDISSEKKKKKQHPSSYAQKLRDFTEKCWTLPVALVTVSVIVSFLYLRRT 127
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 7942550 7943343 + Conep13aG0092500.1 Cone13ag0897 451284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag0897 127 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037(InterPro)
Cone13ag0897 127 Gene3D - 4 97 IPR036400 -
Cone13ag0897 127 MobiDBLite consensus disorder prediction 56 95 - -
Cone13ag0897 127 Pfam Cytochrome b5-like Heme/Steroid binding domain 10 71 IPR001199 -
Cone13ag0897 127 MobiDBLite consensus disorder prediction 56 89 - -
Cone13ag0897 127 FunFam Cytochrome b5 type B 3 90 - -
Cone13ag0897 127 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 71 IPR001199 -
Cone13ag0897 127 SMART Cyt_b5_2 8 82 IPR001199 -
Cone13ag0897 127 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 73 IPR036400 -
Cone13ag0897 127 PANTHER CYTOCHROME B5 5 118 IPR050668 GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0897 Cone-Chr13:7942550 Cone7ag0386 Cone-Chr7:1704037 1.08E-21 dispersed
Cone13ag0897 Cone-Chr13:7942550 Cone19ag0893 Cone-Chr19:6999565 1.02E-19 wgd
Cone13ag0897 Cone-Chr13:7942550 Cone9ag0531 Cone-Chr9:2544585 1.33E-35 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag0897 K23490 - rcu:8264695 149.058