Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag0899 ATGGCTTCTCTCTCTTTCCCTCACTTTCTCTCTTTTCAGAGGTGTAGTTCGAATCGGCCGAACTATAGCTTCCCTTACCTCAATGTCGTTCAACTTCAGGATTTCAGATTCCAGAAGAAATGGTCACTCTCTGTAACTTCTAAGAAGAAAATTGCAGAAAGTGTAGCTCAAGAAGATGAGGTTGTTAATGAAAAGGAAGAAGCAGCAGAAAAGAAGACATCCAGAACAAGAAAACGGGCCACCCCACGTGCAAAGAAGAAAGCCATACAAAATTCCGAGCAGGAGAATTCTGAATTACTGGCAGTTAATGATTCTTCAAATGATGAAAGCTCCATTTCTGCATCGACCAAAGAATCCAAGAAAACCCCTCGAAAAACTACAAGAAGAGCTGCATCTAATTCTACTAGCACGGAGGAAGATAAAACAACCGAAAAGAAGGTAAAAAGGGGTCGAAAGGCAAAGAAGAAAAGTGATGACATTGATCATCAATTAAGTGAATCTAAAGTTAATGATAACGAGGAGTCTACATTTTTAACTAATATAGAAACTGAAAAAGAAGAGGACTCAGATTTAGATATTGGTGATGGAGAAGATATAAGTGACACGTATAGTTGGCCTCCTCTTGTCTGTTGTTTTGGCGCTGCTCAACATGCTTTCGTGCCTTCTGGAAGGCCAGCTAACCGACTAACAGACTATGAAATCCACGAGAGCAAGAAAGACGCTTTGTGGGCCCCGGAAAAGTTCGTTAGGGCGCCAGGGGGGTCTGCTGGAAGCATAGCAATTGCTCTGGCTAGCTTGGGTGGGAGAGTGGCTTTCATGGGGAAGCTAGGGGATGATGAGTATGGTCAAGCTATACTATATTATATGAATGTGAATAATGTTCAAACCCGTTCTGTTAAAGTTGATAGTAAGAAGTTAACAGCATTGTCTCAGATGAAGATCGGGAAAAGGGGTCGGTTGAGAATGACTTGTGTGAAGCCTTGTGCTGAGGATTCTTTGTCCAAGTCAGAGATTAATACTGATGTGCTAAAGGAGGCAAAGATATTCTACTTCAATACACATTCACTCCTTGATCAGAACATGAGATTGACTACCTTGAAAGCCATCAAAATTTCTAAGAAGCTAGGAGGAGTTATCTTTTATGACGTGAACCTTCCTTTACCTCTATGGCAATCCCATGATGAAACAAAACTACTTCTCGAGCAAGTATGGAATCTTGCAGATATTATCGAAATTACCAAGCAAGAACTTGAGTTTCTAACTGGGATCGAGCCCGCTGAGGAGTTTGACACCAAAAATAACGACGTCTCAAAGTTTATCCATTATGATCGGGAAGTAATTGCCCCAATTTGGCATAAGAATCTTAAGGTTCTGTTTGTAACTAATGGTACTTCTAAGGTACACTACTACACTGAGGAACATGATGGGTCTATTCTTGGAATGGAAGATCCCCCTATTACCCCTTTCACTTGTGATATGTCTGCTTCTGGAGATGGCATTGTTGCAGGTCTCTTGAGAATGTTGGCAGTGCAGCCAGAGTTAACTCTGGATAAACCTTACTTGGAGCGGACGATAAACTATGCAATTCAATGTGGGGTCATAGACCAGTGGATTCTGGGCCGAACCAGAGGATATCCTCCTAAAGATGATATGGAGGAAAACGTTGTTCCTGATGAGAATGGAATAAGGTCCATAACGGAAAGGAAATTCCGGACTTTAGAGCCTGTAAGTTTAACGTTTTAG 1743 41.54 MASLSFPHFLSFQRCSSNRPNYSFPYLNVVQLQDFRFQKKWSLSVTSKKKIAESVAQEDEVVNEKEEAAEKKTSRTRKRATPRAKKKAIQNSEQENSELLAVNDSSNDESSISASTKESKKTPRKTTRRAASNSTSTEEDKTTEKKVKRGRKAKKKSDDIDHQLSESKVNDNEESTFLTNIETEKEEDSDLDIGDGEDISDTYSWPPLVCCFGAAQHAFVPSGRPANRLTDYEIHESKKDALWAPEKFVRAPGGSAGSIAIALASLGGRVAFMGKLGDDEYGQAILYYMNVNNVQTRSVKVDSKKLTALSQMKIGKRGRLRMTCVKPCAEDSLSKSEINTDVLKEAKIFYFNTHSLLDQNMRLTTLKAIKISKKLGGVIFYDVNLPLPLWQSHDETKLLLEQVWNLADIIEITKQELEFLTGIEPAEEFDTKNNDVSKFIHYDREVIAPIWHKNLKVLFVTNGTSKVHYYTEEHDGSILGMEDPPITPFTCDMSASGDGIVAGLLRMLAVQPELTLDKPYLERTINYAIQCGVIDQWILGRTRGYPPKDDMEENVVPDENGIRSITERKFRTLEPVSLTF 580
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 7946615 7949603 + Conep13aG0092700.1 Cone13ag0899 451286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag0899 580 MobiDBLite consensus disorder prediction 52 75 - -
Cone13ag0899 580 SUPERFAMILY Ribokinase-like 237 553 IPR029056 -
Cone13ag0899 580 PANTHER HEXOKINASE FAMILY MEMBER 206 553 IPR050306 GO:0009658(PANTHER)|GO:0009662(PANTHER)|GO:0042644(PANTHER)|GO:0042793(PANTHER)
Cone13ag0899 580 MobiDBLite consensus disorder prediction 93 113 - -
Cone13ag0899 580 Pfam pfkB family carbohydrate kinase 238 509 IPR011611 -
Cone13ag0899 580 MobiDBLite consensus disorder prediction 154 169 - -
Cone13ag0899 580 FunFam Fructokinase-like 2, chloroplastic 209 559 - -
Cone13ag0899 580 Coils Coil 89 109 - -
Cone13ag0899 580 CDD bac_FRK 208 540 - -
Cone13ag0899 580 MobiDBLite consensus disorder prediction 52 194 - -
Cone13ag0899 580 Gene3D - 209 561 IPR029056 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0361 Cone-Chr10:1699753 Cone13ag0899 Cone-Chr13:7946615 1.52E-102 dispersed
Cone13ag0899 Cone-Chr13:7946615 Cone3ag0391 Cone-Chr3:1952864 4.73E-61 dispersed
Cone19ag0897 Cone-Chr19:7004718 Cone13ag0899 Cone-Chr13:7946615 7.86E-42 transposed
Cone13ag0899 Cone-Chr13:7946615 Cone19ag0896 Cone-Chr19:7003843 1.01E-09 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag0899 - - - 0.0