Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone13ag0900 | ATGGATCTAGCTGTGGATAAAAAAGACAGAGAGCTGAGGATTCATGAAAGCTTGGATGAGCTTAGCACCGATTTGGTTGATTATATTGCTGAATTATCCGAAGCATCAGTTAAGGAAAGAGGTGTTTTTGCTATTGCTTTGTCTGGTGGTTCTCTCATTGGCTTAATGAGGAAATTGTGTGAAGTTCCTTATAGCAAGACTGTAGATTGGGCAAAATGGTACATATTTTGGGCTGATGAGAGAGTTGTGGCAAAGAGTCATGATGATAGCAATTACAAGCTCACAAAAGACAAGCTTTTATCCAAGGTCCCAGTTGTTCCGAGTCATGTACATTCTATCAATGACTCAGTCTCAGCCGAGGAAGCTGCCATTGAATATGAGTTTGTGATCCGACAACTGGTCAAATCCCGAACAATCAACGTTTCAGACATAAGCGACTGCCCCAAGTTTGACCTCATACTTCTCGGGATGGGCCCAGACGGCCACGTGGCCTCGCTATTCCCTGACCACCCTGTGCTTGAGGAGAAGGACGAATGGGTCACTTTCTTGACCGATTCCCCTAAACCCCCACCCGAGAGAATCACATTCACTCTGCCTGTGATCAATTCGGCTTCTAATGTGGTTGTGGTTGTTATGGGTGAGAGTAAGGCCGAGACTGTACACCTGGCAGTCGATGATGTGGGGCCAAACTGCCCATTGCTTCCAGCAAGGATGGTGCAGCCGAGGAAAGGGAAGTTGGTTTGGTTTATGGACAGGGCAGCTGCTTCGAAACTCGATAGTTTTCAATGCTCCGAGTAG | 798 | 46.62 | MDLAVDKKDRELRIHESLDELSTDLVDYIAELSEASVKERGVFAIALSGGSLIGLMRKLCEVPYSKTVDWAKWYIFWADERVVAKSHDDSNYKLTKDKLLSKVPVVPSHVHSINDSVSAEEAAIEYEFVIRQLVKSRTINVSDISDCPKFDLILLGMGPDGHVASLFPDHPVLEEKDEWVTFLTDSPKPPPERITFTLPVINSASNVVVVVMGESKAETVHLAVDDVGPNCPLLPARMVQPRKGKLVWFMDRAAASKLDSFQCSE | 265 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 13 | 7949758 | 7951611 | - | Conep13aG0092800.1 | Cone13ag0900 | 451287 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone13ag0900 | 265 | Pfam | Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase | 18 | 248 | IPR006148 | GO:0005975(InterPro) | |
| Cone13ag0900 | 265 | Gene3D | - | 7 | 261 | - | - | |
| Cone13ag0900 | 265 | SUPERFAMILY | NagB/RpiA/CoA transferase-like | 11 | 259 | IPR037171 | - | |
| Cone13ag0900 | 265 | FunFam | Probable 6-phosphogluconolactonase | 7 | 259 | - | - | |
| Cone13ag0900 | 265 | CDD | 6PGL | 19 | 250 | IPR005900 | GO:0005975(InterPro)|GO:0006098(InterPro)|GO:0017057(InterPro) | |
| Cone13ag0900 | 265 | PANTHER | 6-PHOSPHOGLUCONOLACTONASE | 7 | 259 | IPR039104 | - | |
| Cone13ag0900 | 265 | NCBIfam | 6-phosphogluconolactonase | 14 | 258 | IPR005900 | GO:0005975(InterPro)|GO:0006098(InterPro)|GO:0017057(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone13ag0900 | Cone-Chr13:7949758 | Cone5ag0718 | Cone-Chr5:3091261 | 1.11E-93 | dispersed | |
| Cone13ag0900 | Cone-Chr13:7949758 | Cone19ag0898 | Cone-Chr19:7005887 | 1.56E-183 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone13ag0900 | K01057 | - | csv:101210739 | 441.81 |