Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag0901 ATGGATCGCAGTTCCACACCTCGCCGGAACCGGAAACCTCAAACCAGATCGGATATATATTCCACCGTCATCGTCTACTCCGACTCCGATTCTGACTCCGATCATAATCCGAATGACCAGAAGAAGCCTCAACCGCGGCGCAAACAAGAGCAGGATCTCTACGCCACAATGATCTACAAGGACGATGCTCGAGACGGCGATGAAGAATTCGAAGATGACGACTCCTCTCTCCCTCCCTTACTTAAACGACTTCCCAAGGATTTCGGTGGTGGAGCTCCAATTGACTATGAGGACGATGATTTCAATTCAGATAACGACGCTGGGGATTTCGGCACCATGATCGTCAAATCTGACAAGAATCGACCTCAGAATCGGTATTCATCTTCCTCCAGTACGATAAAGTCTCGGAGTTCGCCGTTCTCGGATTCTAGGAAGCGAATGGGCGGCATTGGTGGTAGTGGTGAAGATGACGAGGACGAAGGAGGTGATAATGATCCGTTTTCAACGTTCGTGGTGAGGTCCACGTTGAGGTCTAGCGAGAGAGAATCAGTGAGTGGGACTATGGTGAGGAGGACTAGTGGTGGTGGAGCTGGAGAGCTGGACGGCTCGACGTTGAGTAGAGCAGTGGCGAGTATGCAAGCAGTGGGAGAGATAGGGTTTGGTAAGCAGAGGAACGGGAATGGGCATTCGCATGGTGAAGAGGGTGGTGGTCGGCAGACTACGAAGATGTCATCGAGCTCGATTCCAGGGGGCCTTGCCTTGGAAGATCCTACTACCAAGTACGAGCTGCTAAACGAACTAGGTAAAGGGTCTTATGGGGCTGTTTACAAAGCTAGGGATATTAAAACATCCGAGCTTGTTGCTATTAAGGTCATATCACTAACTGAAGGGGAGGAAGGATATGAAGAAATTCGTGGTGAGATAGAGATGTTGCAGCAATGTAGTCATCCTAATGTTGTCCGCTACCTTGGGAGCTACCAAGGAGAAGAATATCTTTGGATAGTGATGGAGTACTGTGGCGGTGGAAGTGTTGCTGACTTAATGAATGTTACCGAGGAACCTTTAGAGGAGTATCAGATAGCATATATTTGCCGGGAGGCATTGAAGGGACTTGCATATCTGCACTCAATATTCAAGGTTCATAGAGATATCAAAGGTGGAAATATCTTACTAACTGAACAGGGAGATGTCAAGTTGGGTGATTTTGGAGTTGCAGCTCAGCTTACAAGAACCATGTCAAAGCGCAACACTTTCATTGGCACTCCACATTGGATGGCTCCAGAAGTTATTCAGGAAAGTCGCTATGATGGAAAGGTGGATGTGTGGGCTCTTGGTGTATCTGCTATTGAAATGGCTGAGGGACTTCCTCCAAGATCAGCAGTTCATCCCATGAGGGTTTTGTTCATGATATCCATTGAGCCAGCTCCAATGCTCGAGGATAAGGAAAAATGGTCTTTGCTATTCCATGATTTTATTGCAAAGTGCCTAACAAAAGAACCTCGTGTACGTCCAACTGCAGCCGAGTTGCTGAAGCACAAGTTCATCGATAAATGCAAATGTGGAGCCACAGTGATGGTGCCAAAGATTGAAAAGGCTAGGGAAATTAGGACCGAAATGGCTCTTCAAGAACAAGCCCCGGGTGCAGCTCCAGATAATACTCTTGGAGCTCCAAAGGTTAATGAGGATTATGGAGATACTGTTCCTTCAAGGCCCCAGAATATTGCTCCTATGGCTGAAGAACTTTCCTCAGAAGCAGTTGACTTTGGCACAGTAATTGTTCATGGTGGAGATGAGATAGATGAGACAATTTCTCGGACCCGAACTGTGAAGGCTGAACCATCAACTTCTCCTTTACTTGATGAAGGCCCTTCCATCAGTGGGACAGGAGGAAAACAAGTTTATTCCGGTGTGGATGTTACAGGAGCGGTTGCAAATAATGCTCTAGATGAAAAATCACAGACACCGGGCACATCGTCACCCTCACTGCTTGGCATGCATGAGCAAAACTTCAAGATGAAAAGCATTTCTCAAGGGCGGGGCATCGGCCTGAGTATGGGCACTGGCACGGTAAAAGGTGAAACAGGTGGTTGGAAAGCCTTTGCCTTACAAGATAAGCTTTGGTCCATATATGCTACTGGCAGTACCGTGCCCATTCCATTCTTGAAGGCAACGGATATATCCCCAATTGCTTTATTATCAGACAATGTCCTTGGAGGCAAGCCAGAGGAAAACAGTGGAACTGCTGCAATAGAAGCGCTTCAGGAACTTTTTACTGGTGATACACAATCAAAGAAGGGTCGAAGAGGACAGAATGAGATTCCTCTGCCTCCAAGTGTTTACCGAACTCTCACTTCTAGCTCAACTCTATTGAACCTGGCACAGGCTCTAGCTTACCACAAAATGTGCTATGAAGATATGCCTCTTCAGGAGTTGCAAGCGACACAAGAGCAACAGACAATACAGAATCTTTCTGATACACTTAGAACTATTCTTCGACTCTAA 2502 46.84 MDRSSTPRRNRKPQTRSDIYSTVIVYSDSDSDSDHNPNDQKKPQPRRKQEQDLYATMIYKDDARDGDEEFEDDDSSLPPLLKRLPKDFGGGAPIDYEDDDFNSDNDAGDFGTMIVKSDKNRPQNRYSSSSSTIKSRSSPFSDSRKRMGGIGGSGEDDEDEGGDNDPFSTFVVRSTLRSSERESVSGTMVRRTSGGGAGELDGSTLSRAVASMQAVGEIGFGKQRNGNGHSHGEEGGGRQTTKMSSSSIPGGLALEDPTTKYELLNELGKGSYGAVYKARDIKTSELVAIKVISLTEGEEGYEEIRGEIEMLQQCSHPNVVRYLGSYQGEEYLWIVMEYCGGGSVADLMNVTEEPLEEYQIAYICREALKGLAYLHSIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGLPPRSAVHPMRVLFMISIEPAPMLEDKEKWSLLFHDFIAKCLTKEPRVRPTAAELLKHKFIDKCKCGATVMVPKIEKAREIRTEMALQEQAPGAAPDNTLGAPKVNEDYGDTVPSRPQNIAPMAEELSSEAVDFGTVIVHGGDEIDETISRTRTVKAEPSTSPLLDEGPSISGTGGKQVYSGVDVTGAVANNALDEKSQTPGTSSPSLLGMHEQNFKMKSISQGRGIGLSMGTGTVKGETGGWKAFALQDKLWSIYATGSTVPIPFLKATDISPIALLSDNVLGGKPEENSGTAAIEALQELFTGDTQSKKGRRGQNEIPLPPSVYRTLTSSSTLLNLAQALAYHKMCYEDMPLQELQATQEQQTIQNLSDTLRTILRL 833
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 7955235 7961815 - Conep13aG0092900.1 Cone13ag0901 451288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag0901 833 ProSiteProfiles Protein kinase domain profile. 261 515 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone13ag0901 833 MobiDBLite consensus disorder prediction 1 202 - -
Cone13ag0901 833 ProSitePatterns Protein kinases ATP-binding region signature. 267 290 IPR017441 GO:0005524(InterPro)
Cone13ag0901 833 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 234 571 IPR050285 GO:0006468(PANTHER)|GO:0035556(PANTHER)|GO:0043408(PANTHER)
Cone13ag0901 833 FunFam serine/threonine-protein kinase dst1 isoform X1 258 549 - -
Cone13ag0901 833 MobiDBLite consensus disorder prediction 117 138 - -
Cone13ag0901 833 MobiDBLite consensus disorder prediction 237 252 - -
Cone13ag0901 833 MobiDBLite consensus disorder prediction 607 631 - -
Cone13ag0901 833 CDD STKc_MAP4K3_like 260 515 - -
Cone13ag0901 833 MobiDBLite consensus disorder prediction 16 31 - -
Cone13ag0901 833 SUPERFAMILY Protein kinase-like (PK-like) 258 516 IPR011009 -
Cone13ag0901 833 Gene3D Transferase(Phosphotransferase) domain 1 257 548 - -
Cone13ag0901 833 MobiDBLite consensus disorder prediction 1 15 - -
Cone13ag0901 833 MobiDBLite consensus disorder prediction 168 190 - -
Cone13ag0901 833 SMART serkin_6 261 515 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone13ag0901 833 Pfam Protein kinase domain 261 515 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone13ag0901 833 MobiDBLite consensus disorder prediction 32 64 - -
Cone13ag0901 833 MobiDBLite consensus disorder prediction 219 254 - -
Cone13ag0901 833 FunFam Aurora kinase A 255 342 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0901 Cone-Chr13:7955235 Cone6ag0161 Cone-Chr6:791788 2.43E-78 dispersed
Cone13ag0901 Cone-Chr13:7955235 Cone19ag0899 Cone-Chr19:7013667 0 wgd
Cone13ag0901 Cone-Chr13:7955235 Cone2ag0776 Cone-Chr2:33726449 1.71E-28 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82036 PF04091 Sec15 2.40E-77 CL0295 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag0901 - - - 0.0