Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag0909 ATGGCCTATTTAGTGTGCTTAGTTGTCCTCTTGGCCCTTATTAGCTATTCAAGTGCTAACTACTGCTTATGCAAGGATGGAGCCAGCGAGCAAGCTATGCAAAAGGCAATAGATTATGCCTGTGGAGCAGGAGCTGATTGCTCTACCATTCAGTCAAGTGGGGCTTGTTATCAACCAAACACAGTGAAAAATCACTGCGATTATGCTGTTAATAGCTACTTCCAAAGAAAGGGTCAAGTTTCTGGCAGCTGTGATTTTTCAGGAACTGCTACTCCGACTGTTACAGCTCCCGCTGCATCTACTGGTACTTGTGTTTATCCTGCTAGCCCCAGCACTGCAGGTACGGCTCCGAGCACCACCACACCATCAACGACCCCCCCAAGCACCACCACGCCGTCAACCACCCCCCCAAGCACCACCACGCCGTCCACCACGACTCCGTCCACAATTACCCCTTCCACCACCACAACTCCCTCCACAACTACCTCTCCGACTACCACTACTCCTACAGTGTTTGGGTCAGGGATAAGCCCGTCCGGAACAGGCCTCGACGGGAGTGGAGCTGTGGCCCACACTCAACTCACCAGTCTCTTTTTCTACTCTCTAGCACTCTGCATTTCAGGCTGCTACTTCCTGCTTTGGTGCTGA 648 52.01 MAYLVCLVVLLALISYSSANYCLCKDGASEQAMQKAIDYACGAGADCSTIQSSGACYQPNTVKNHCDYAVNSYFQRKGQVSGSCDFSGTATPTVTAPAASTGTCVYPASPSTAGTAPSTTTPSTTPPSTTTPSTTPPSTTTPSTTTPSTITPSTTTTPSTTTSPTTTTPTVFGSGISPSGTGLDGSGAVAHTQLTSLFFYSLALCISGCYFLLWC 215
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 7997567 7999239 - Conep13aG0093700.1 Cone13ag0909 451296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag0909 215 MobiDBLite consensus disorder prediction 111 178 - -
Cone13ag0909 215 FunFam Glucan endo-1,3-beta-glucosidase 4 15 110 - -
Cone13ag0909 215 Pfam X8 domain 21 91 IPR012946 -
Cone13ag0909 215 SMART X8_cls 20 106 IPR012946 -
Cone13ag0909 215 Gene3D - 15 113 - -
Cone13ag0909 215 PANTHER BETA-1,3 GLUCANASE 12 108 IPR044788 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0038 Cone-Chr13:228804 Cone13ag0909 Cone-Chr13:7997567 8.50E-36 dispersed
Cone13ag0909 Cone-Chr13:7997567 Cone6ag1096 Cone-Chr6:6789928 4.28E-23 dispersed
Cone13ag0909 Cone-Chr13:7997567 Cone16ag0202 Cone-Chr16:1333894 1.17E-36 wgd
Cone13ag0909 Cone-Chr13:7997567 Cone19ag0903 Cone-Chr19:7037382 8.43E-78 wgd
Cone13ag0909 Cone-Chr13:7997567 Cone2ag0806 Cone-Chr2:34067696 1.04E-35 wgd
Cone13ag0909 Cone-Chr13:7997567 Cone6ag0530 Cone-Chr6:2634454 2.03E-46 wgd
Cone13ag0909 Cone-Chr13:7997567 Cone9ag0544 Cone-Chr9:2599542 7.03E-47 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag0909 - - - 0.0