Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag0910 ATGGCTTCCATCACAGGCTTAATCAACTCTCCAATCGGAACTTGTCGACTGTCTTCACTCTATTTGCCCGCCAAAAAAGTTTTCGCGAGTAATGTTGTGCCAAAAAGTCGACTAAGTGTTTCTCAAGCTTCAAGCTTGAGCTTCTCGCCGTTGGCGGAGAGGAAGGATTTTCCGACACAGGTTGACGACTTCTCCGGCAAGGCCCTGACGTTCTTGGGTTGGGGCCAATTGCTAAAGCGTCGAGGTTCGGTTCGGTCTCCGGTGGTGGTAGCTACTGCAGCTGCTGATGCTGATGGAATCTCAGACGGATTGGCTAAGCCTTCGACGAGTTTTGCTGCGAAATTCCCGGCACTTGTCACCGGTTTCTATTTCTTCATGTGGTACTTACTAAATGTCATCTTCAATATACTCAACAAGAAAGTCTACAATTACTTCCCATATCCATACTTTGTTTCCGTTATACATCTTCTTGTTGGAGTAATATACTGTCTCATCTGTTGGGCCCTCGGTCTACCAAAACGTGCCCCGATCGATAAAGAGACCTTGGCAGTACTGACTCCGGTTTCTATGTGTCATGCCCTTGGACATGTCATGTCTAATGTTTCATTCGCAGCTGTTGCTGTTTCCTTCACTCACACCATTAAAGCTTTGGAGCCTTTCTTTAGTGCTTCAGCTTCTCAGTTTGTTCTCGGCCAACATATTCCGGCTGCTCTATGGCTATCGCTGGCCCCAGTTGTTATAGGTGTATCAATGGCATCACTGACCGAACTTTCCTTCAACTGGACTGGTTTTACGAGTGCAATGATTTCGAACATTGCATTTACCTATAGAAGCATTTACTCAAAGAAAGCTATGACGGGAATGGACAGTACCAATGTGTATGCTTACACCTCCGTAATCGCTCTTTTCTTCTGCATCCCACCGGCAATACTTATCGAAGGACCGAAATTGATGCAGTATGGATTTAGTGATGCTATTGTTAAAGTGGGTCTGTACAAGTTCTTGTCTGATCTCTTCTGGATTGGATTGTTCTATCATCTCTACAATCAGCTCGCTACAAACACATTGGAAAGAGTGGCGCCACTTACTCATGCCGTTGGGAATGTATTGAAGCGAGTCTTTGTGATTGGATTCTCGATCGTGGTTTTCGGCAATAGGATTTCAACACAAACTGGAATCGGTACCATCATAGCAATTGCAGGAGTTGCCATCTACTCTTTTATAAAGGCCAAAATGGAAGAAGAAAAACGAAAAGTTACTCCAAATCCAGCTTCTTAG 1278 44.68 MASITGLINSPIGTCRLSSLYLPAKKVFASNVVPKSRLSVSQASSLSFSPLAERKDFPTQVDDFSGKALTFLGWGQLLKRRGSVRSPVVVATAAADADGISDGLAKPSTSFAAKFPALVTGFYFFMWYLLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVIYCLICWALGLPKRAPIDKETLAVLTPVSMCHALGHVMSNVSFAAVAVSFTHTIKALEPFFSASASQFVLGQHIPAALWLSLAPVVIGVSMASLTELSFNWTGFTSAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSVIALFFCIPPAILIEGPKLMQYGFSDAIVKVGLYKFLSDLFWIGLFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNRISTQTGIGTIIAIAGVAIYSFIKAKMEEEKRKVTPNPAS 425
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 8001985 8005282 - Conep13aG0093800.1 Cone13ag0910 451297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag0910 425 SUPERFAMILY Multidrug resistance efflux transporter EmrE 161 255 - -
Cone13ag0910 425 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 118 416 IPR004696 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cone13ag0910 425 SUPERFAMILY Multidrug resistance efflux transporter EmrE 335 407 - -
Cone13ag0910 425 PANTHER SOLUTE CARRIER FAMILY 35 116 408 IPR050186 GO:0005794(PANTHER)|GO:0015297(PANTHER)
Cone13ag0910 425 Pfam Triose-phosphate Transporter family 119 406 IPR004853 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0910 Cone-Chr13:8001985 Cone9ag0995 Cone-Chr9:5133765 6.74E-184 dispersed
Cone13ag0910 Cone-Chr13:8001985 Cone6ag0991 Cone-Chr6:5437760 3.35E-184 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag0910 K15283 - mdm:103402827 611.683