Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone13ag0914 | ATGGATGATAACGACCACAAGCCCGATCCATCTGGAACAGAGTTCACTGGCGATTCAAGCTGGACCACTTTCGCAGCCGACACCGACAGTGTCTATAACCTAATTTCCAGCAGTGTGAGACAGAGAAGTAGCAGTGTTCTCGGTGAATTCAGCTGGAATTTTCAGCCGGATGATGAGAATCGAGGAACAGATGAGTACGGACGGTTCCCGTACCTCGACCGGATCTGTTCGGAAGCTGATAGGTCTTCCGATTTGGCGGGAAGCTTCGAAGATGTGCCAACGGAGATAAACAACAACTACAATAACGTGTCCAGCTCGTTGACAAGCTCTGACCAGGCGGTTCCGATCGGATCTGTAGGAGATGCGTCGACGTCTAACCCGTCTTTGTCTTCGACCTCAAGTGAGGCTGGTGAACTGACGGAGAAGTCGACGGGATCCGGCGGGAAACCGCCTGAGATACCGAGCAAGAAGAATCAGAAGAAAGGGCAAAAGCGAATCCGGCAACAGAGAGTTGCATTCATAACTAAGAGCGAGGTTGATCATCTCGAAGATGGGTATCGGTGGCGGAAATATGGTCAGAAACCTGTAAAAAATAGTCCTTTCCCGAGGAGTTACTATCGGTGCACAAACAGCAAATGCACGGTGAAGAAGAGAGTGGAACGCTCGTCGGAAGATCCCACCCTTGTAATAACAACGTATGAAGGCCAACACTGTCATCACACCGTTGGATTCCCACGAGGTGGTGGGACCAATAGTATCTTCAGTCATATTGATCATCACCAACATCCTCCTCCTGCCTTTGCTTCAGCTCATCAATTTCTTCGCCCCGTTTCAGAAGTTAGTTACAATCACTCCAATCCGAACACTATCCATCAGCTACCCCATGAAAATATTATTAATCCTACTCCTCGAAGAAGTCCACAGTCACTTGATCACCAGCAGATCGTATCCGGAGATCAATCCCAATTTTTTCCGCCAGCAGATCGTGATCGTGATCGTGATGATGATCAGGCAGATGAAGGTCTGCTTGGCGACATTGTGCCACACAGAATGCGCAACAGATGA | 1065 | 48.92 | MDDNDHKPDPSGTEFTGDSSWTTFAADTDSVYNLISSSVRQRSSSVLGEFSWNFQPDDENRGTDEYGRFPYLDRICSEADRSSDLAGSFEDVPTEINNNYNNVSSSLTSSDQAVPIGSVGDASTSNPSLSSTSSEAGELTEKSTGSGGKPPEIPSKKNQKKGQKRIRQQRVAFITKSEVDHLEDGYRWRKYGQKPVKNSPFPRSYYRCTNSKCTVKKRVERSSEDPTLVITTYEGQHCHHTVGFPRGGGTNSIFSHIDHHQHPPPAFASAHQFLRPVSEVSYNHSNPNTIHQLPHENIINPTPRRSPQSLDHQQIVSGDQSQFFPPADRDRDRDDDQADEGLLGDIVPHRMRNR | 354 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 8023565 | 8026212 | - | Conep13aG0094200.1 | Cone13ag0914 | 451301 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone13ag0914 | 354 | Gene3D | WRKY domain | 169 | 235 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone13ag0914 | 354 | MobiDBLite | consensus disorder prediction | 281 | 354 | - | - | |
Cone13ag0914 | 354 | SUPERFAMILY | WRKY DNA-binding domain | 175 | 240 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone13ag0914 | 354 | MobiDBLite | consensus disorder prediction | 325 | 354 | - | - | |
Cone13ag0914 | 354 | FunFam | WRKY transcription factor 57 | 168 | 242 | - | - | |
Cone13ag0914 | 354 | ProSiteProfiles | WRKY domain profile. | 177 | 242 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone13ag0914 | 354 | MobiDBLite | consensus disorder prediction | 281 | 321 | - | - | |
Cone13ag0914 | 354 | MobiDBLite | consensus disorder prediction | 41 | 67 | - | - | |
Cone13ag0914 | 354 | Pfam | WRKY DNA -binding domain | 183 | 239 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone13ag0914 | 354 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Cone13ag0914 | 354 | MobiDBLite | consensus disorder prediction | 107 | 141 | - | - | |
Cone13ag0914 | 354 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 101 | 280 | IPR044810 | GO:0003700(InterPro) | |
Cone13ag0914 | 354 | SMART | WRKY_cls | 182 | 241 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone13ag0914 | 354 | MobiDBLite | consensus disorder prediction | 107 | 170 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone10ag0319 | Cone-Chr10:1518014 | Cone13ag0914 | Cone-Chr13:8023565 | 4.55E-23 | dispersed | |
Cone13ag0914 | Cone-Chr13:8023565 | Cone5ag1608 | Cone-Chr5:11290360 | 9.40E-42 | dispersed | |
Cone13ag0914 | Cone-Chr13:8023565 | Cone19ag0910 | Cone-Chr19:7071382 | 6.23E-205 | wgd | |
Cone13ag0914 | Cone-Chr13:8023565 | Cone6ag0541 | Cone-Chr6:2670377 | 6.64E-77 | wgd | |
Cone13ag0914 | Cone-Chr13:8023565 | Cone9ag0551 | Cone-Chr9:2624393 | 3.96E-62 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
44645 | PF00931 | NB-ARC | 8.40E-41 | CL0023 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone13ag0914 | - | - | - | 0.0 |