Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag0934 ATGAGCTCCGAGAATTCAGTAAGCGGCGGTGATTCGTCGGCGCCAGGACAGGCAGGTGTGAGTAAGGGAAGCTCGACCGGAACGTCAGGGGCGACGGAGAGAAGTAAGGAGAAATCTAGAGTTAGCAGAACGTCGTTGATTCTGTGGCATGCTCATCAAAATGATGCCTCAGCGGTTAGTAAGTTGCTGGAGGAGGATGAATCGCTCGTCCATGCCAGAGACTACGATAGTCGTACTCCTCTCCATGTCGCCTCCCTCCATGGTTGGATCGACGTCGCTAAAGTCCTGCTTGAGCACGGTGCTGATGTCAACGCCCAAGATCGTTGGAAGAACACTCCCCTGGCTGATGCAGAGGGTGCTAAAAAGCAAGCCATGATTGCACTGCTAAAATCCAGCGGCGGACTCTCTTATGGCCAAAATGGAAGCCATTTTGAACAAAAGCCTGTTCCACCCCCACTCCCGAACAAATGTGACTGGGAGATTGACCCTTTTGAGCTGGACTTTTCAAACTCAAACCTTATAGGCAAGGGATCCTTTGGTGAGATATTAAGAGCGTATTGGCGTGGAACACCTGTAGCTATAAAACGAATTCTTCCATCACTGTCAGATGATCGATTGGTGATTCAGGACTTCAGGCATGAGGTTAATTTACTAGTGAAGCTTCGCCACCCAAATATAGTCCAATTTCTTGGAGCTGTCACTGATAAAAAGCCCCTTATGTTAATTACCGAGTACTTACGAGGGGGTGATCTTCATCAATACCTCAAGGAAAAAGGCTCTCTTAATCCGTCAATAGCTATCAATTTTGCACTGGACATTGCCAGAGGCATGGCTTATCTTCACAATGAGCCAAATGTTGTAATTCACCGAGATCTAAAACCAAGGAATGTTCTTTTAGTGAATTCTAGTGCTGACCATTTAAAGGTTGGAGATTTTGGACTCAGTAAGCTCATCAAAGTTCAAAATTCTCATGATGTTTACAAACTGACTGGCGAAACTGGAAGTTACCGGTATATGGCTCCTGAAGTTTTCAAGCATCGGAAATATGACAAGAAAGTTGATGTTTTCTCCTTTGCAATGATTCTATATGAGATGCTTGAAGGTAACCCACCGCTTGCAAATTACGAACCTTACGAGGCAGCAAAATATGTCGCAGAAGGACATAGACCTATCTTCCGTGCAAAAGGATACACCGTTGAGCTAAGAGAGTTAACGGAGCGGTGTTGGGCTGCAGACATGAACAGGAGACCTCATTTCTTAGAAATTCTCAAAAAACTTGAAAATATCAAGGAAAATCTGCCAACAGATCATCACTGGAGCATATTCAATGCATGA 1335 45.02 MSSENSVSGGDSSAPGQAGVSKGSSTGTSGATERSKEKSRVSRTSLILWHAHQNDASAVSKLLEEDESLVHARDYDSRTPLHVASLHGWIDVAKVLLEHGADVNAQDRWKNTPLADAEGAKKQAMIALLKSSGGLSYGQNGSHFEQKPVPPPLPNKCDWEIDPFELDFSNSNLIGKGSFGEILRAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLGAVTDKKPLMLITEYLRGGDLHQYLKEKGSLNPSIAINFALDIARGMAYLHNEPNVVIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKLTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGNPPLANYEPYEAAKYVAEGHRPIFRAKGYTVELRELTERCWAADMNRRPHFLEILKKLENIKENLPTDHHWSIFNA 444
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 8097746 8107627 + Conep13aG0096200.1 Cone13ag0934 451321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag0934 444 PANTHER SERINE-THREONINE PROTEIN KINASE 29 429 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cone13ag0934 444 PRINTS Tyrosine kinase catalytic domain signature 281 299 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone13ag0934 444 PRINTS Tyrosine kinase catalytic domain signature 397 419 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone13ag0934 444 PRINTS Tyrosine kinase catalytic domain signature 243 256 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone13ag0934 444 FunFam Integrin-linked protein kinase family 247 442 - -
Cone13ag0934 444 ProSiteProfiles Ankyrin repeat profile. 76 108 IPR002110 GO:0005515(InterPro)
Cone13ag0934 444 SMART serkin_6 168 430 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone13ag0934 444 SMART ANK_2a 76 105 IPR002110 GO:0005515(InterPro)
Cone13ag0934 444 Gene3D Transferase(Phosphotransferase) domain 1 159 440 - -
Cone13ag0934 444 SUPERFAMILY Ankyrin repeat 47 133 IPR036770 -
Cone13ag0934 444 ProSitePatterns Protein kinases ATP-binding region signature. 174 195 IPR017441 GO:0005524(InterPro)
Cone13ag0934 444 MobiDBLite consensus disorder prediction 1 41 - -
Cone13ag0934 444 FunFam serine/threonine-protein kinase STY46-like 161 247 - -
Cone13ag0934 444 Pfam Ankyrin repeats (3 copies) 47 107 IPR002110 GO:0005515(InterPro)
Cone13ag0934 444 PIRSF ILK 2 444 - -
Cone13ag0934 444 ProSiteProfiles Protein kinase domain profile. 168 440 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone13ag0934 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 287 299 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone13ag0934 444 SUPERFAMILY Protein kinase-like (PK-like) 164 439 IPR011009 -
Cone13ag0934 444 ProSiteProfiles Ankyrin repeat region circular profile. 76 108 - -
Cone13ag0934 444 Gene3D - 17 141 IPR036770 -
Cone13ag0934 444 MobiDBLite consensus disorder prediction 1 32 - -
Cone13ag0934 444 Pfam Protein tyrosine and serine/threonine kinase 172 426 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone13ag0934 444 CDD STKc_MAP3K-like 174 426 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0934 Cone-Chr13:8097746 Cone5ag1631 Cone-Chr5:11519173 5.05E-92 dispersed
Cone13ag0934 Cone-Chr13:8097746 Cone19ag0927 Cone-Chr19:7148842 1.85E-286 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82038 PF03763 Remorin_C 4.50E-30 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag0934 - - - 0.0