Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag0938 ATGTCTGTTTTGAAATCCGGGCTCGGGTCGAGTCCTATGAAGTCGTCTAAGGTGTTTGGTTATTGCTTGATCGCTCTTCCACTTGTTGCTTTTCTCACTTTAGTTCTTAGAAACCATCCTACTGACCGAACTAAAGACTTTGCTGAAGCCAGAGATTTAGAACGAATCGATCAGCCCAATGCCACCTCTTCATCTTCAAGTTCAGAAGAAGATAAAGTTATAAATGGACTTCTCTCCCCCGGGTTCGATGAATCATCATGCTTAAGCCGCTACCAATCGAGCTCATATCGAAACACTTCACCCTACAAACCTTCTCCTTACCTCATTTCCAGGCTCCGATCTTACGAACAACTCCATAAACAATGCGGGCCGGGAACCGGACCATACAACAAAGCATTGAAGCTACTCAAATCAGGTCATTCTGTTACTTCTACTACAAGCGAATGTAAATATGTCGTTTGGATATCGTTTAGCGGACTTGGAAACCGGATCCTAACTGTGGCATCTTCGTTCCTCTACGCCCTCTTAACAAACAGGGTCCTACTCATCGACCCTGCAAAGGACATTCCCGATTTATTTTGCGAACCGTTTCCAGAAACTTCTTGGTTGCTACCCGATGACTACCCGCTCAAGAAACACTTTGATGAGTTCGATCAAAACTCCAGTCATTGTTACGGGAACATGCTCAAGAGAAACATCAATAAGACATCGGTCGAATCTCCATACACATATCTCTATCTCCATCTAGCTCATAATTATGATGAATATGACAAACTCTTCTTTTGCGATGAAGATCAAATGTTTCTTGAAAAAGTGTACCTGGCGAAAGCTGACGAGCGAATCGGTATGCAAATCCGAATTTTTGAACTTGGGTCTGATACATTCCAACATGTTATAGATCAAATCTCGGCTTGTACGCTGAAAGAAAATTTGTTACCAGAAGTAGATAAGGAAAGGTCCACAATAACCACCCCAACCAAAAACCCTAAATTGAAAGCTGTATTGATGACATCACTAAGTCCGGGGTATTACGAGAATCTACGGACGATATATTGGGAACATCCGACTGTAAATGGAGATTTAGTTGGAGTTTATCAACCGAGCCATGAGATGTTTCAACAATCGGAAAAGCAATTGCATAATCAAAAGGCATGGGCCGAAATGTATTTACTTAGTTTGAGTGATGTGTTGGTTACAAGTGCTTGGTCTACATTTGGATATGTGGCTCAGGGGCTTGGAGGGTTGAGGCCATGGATTCTTATCAAGCCTGAAAACCACACCGTTCCGGTCCCACCTTGTCAGCAAGTTATGTCGATGGAGCCGTGTTTTCATGCTCCGCCATTCTATGACTACAAGGCGAAGAAAGAGATTGATATGGGTGAAGTTGTGCCTTACGTCAAACATTGTGAAGATATGAGTTGGGGACTTAAGGTTGTTGATGAAAATGATCTTGATGTACACTGA 1464 42.62 MSVLKSGLGSSPMKSSKVFGYCLIALPLVAFLTLVLRNHPTDRTKDFAEARDLERIDQPNATSSSSSSEEDKVINGLLSPGFDESSCLSRYQSSSYRNTSPYKPSPYLISRLRSYEQLHKQCGPGTGPYNKALKLLKSGHSVTSTTSECKYVVWISFSGLGNRILTVASSFLYALLTNRVLLIDPAKDIPDLFCEPFPETSWLLPDDYPLKKHFDEFDQNSSHCYGNMLKRNINKTSVESPYTYLYLHLAHNYDEYDKLFFCDEDQMFLEKVYLAKADERIGMQIRIFELGSDTFQHVIDQISACTLKENLLPEVDKERSTITTPTKNPKLKAVLMTSLSPGYYENLRTIYWEHPTVNGDLVGVYQPSHEMFQQSEKQLHNQKAWAEMYLLSLSDVLVTSAWSTFGYVAQGLGGLRPWILIKPENHTVPVPPCQQVMSMEPCFHAPPFYDYKAKKEIDMGEVVPYVKHCEDMSWGLKVVDENDLDVH 487
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 8115929 8117691 + Conep13aG0096600.1 Cone13ag0938 451325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag0938 487 PANTHER FUCOSYLTRANSFERASE 2-RELATED 13 272 IPR004938 GO:0005794(PANTHER)|GO:0008107(InterPro)|GO:0009969(PANTHER)|GO:0016020(InterPro)|GO:0042546(InterPro)
Cone13ag0938 487 Gene3D - 146 199 - -
Cone13ag0938 487 MobiDBLite consensus disorder prediction 47 71 - -
Cone13ag0938 487 FunFam Galactoside 2-alpha-L-fucosyltransferase 147 198 - -
Cone13ag0938 487 Pfam Xyloglucan fucosyltransferase 63 272 IPR004938 GO:0008107(InterPro)|GO:0016020(InterPro)|GO:0042546(InterPro)
Cone13ag0938 487 Pfam Xyloglucan fucosyltransferase 272 452 IPR004938 GO:0008107(InterPro)|GO:0016020(InterPro)|GO:0042546(InterPro)
Cone13ag0938 487 MobiDBLite consensus disorder prediction 57 71 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0938 Cone-Chr13:8115929 Cone14ag0976 Cone-Chr14:7997921 8.42E-149 dispersed
Cone13ag0938 Cone-Chr13:8115929 Cone13ag0939 Cone-Chr13:8118397 1.37E-306 tandem
Cone19ag0932 Cone-Chr19:7162248 Cone13ag0938 Cone-Chr13:8115929 1.30E-48 transposed
Cone13ag0938 Cone-Chr13:8115929 Cone16ag0180 Cone-Chr16:1166158 3.68E-188 wgd
Cone13ag0938 Cone-Chr13:8115929 Cone19ag0931 Cone-Chr19:7161800 1.09E-26 wgd
Cone13ag0938 Cone-Chr13:8115929 Cone2ag0834 Cone-Chr2:34356174 6.66E-189 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag0938 K13681 - mdm:103451794 587.8