Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag0939 ATGGATCCGATTCCATTCAGGAGAAGATCATCAGTATCGTCATCACCCAAAAATCCTACAGATCGTAGCACGGCTGCCATTGGATCCTCCTTCTCGATGTCTGTTTCGAAATCTGGGTTCGGTTCGAGTCCTATGAAGTTGACTAAGGTGCTTGGTTGTTGCTTGATCGCTCTTCCACTTGTTGTTTTTCTCACTTTAGTTCTTAGAAATCCTCATGCTGATCAAACTAAAGGCTTTCCTGAAGCCAGAGTTTTAGAACGAATCAATCAACCCAATTCCACCTCTTCGCCTTCAAGTTCAAAAGAAGATAAATTTATAAGTGGACTTCTCTCCCCCGGGTTCGATGAATCATCATGCTTAAGCCGCTACCAATCGAGCTCATATCGAAAAACTTCACCATACAAACCTTCTCCTTACCTCATTTCAAGGCTCCGATCTTACGAACAACTCCATAAACAATGCGGACCTGGAACCAGACCATACAACGAAGCATTGAAGATACTCAAATCCGGTCATTCCGTTACTTCTATTTCAACCGAGTGTAAATATGTTGTTTGGATGTCATTTAGCGGACTCGGAAACCGGATCCTAACTGTGGCATCTTCGTTCCTCTACGCCCTCTTAACAAACAGGGTCCTACTCATTGATCCTGGTAAGGACATTCCCGATTTATTTTGCGAGCCGTTTCCAGAAACATCTTGGTTGCTACCCGATAACTACCCACTCAAGAAACACTTTGATGAGTTTGGTCAGAACTTCGGTCATTGTTATGGGAACATGCTCAAGAGAAACATCATTAACACATCGGTCGAATCTCCATACTCGTATCTCTATCTCCATCTAGCTCATGATTATAATGAACATGATAAACTCTTCTTTTGCGATGAAGATCAAGCATTTCTTGAAAAAGTACCTTGGTTGATATTGAAAACCAACAACTATTTTGTCCCGTCTTTGTTTCTAATGCCGTCTTTCGAGCAAGAGTTGAGTCAACTTTTTCCGAGGAAAGATACAGTTTTCCATCACTTGGGTCGGTATCTTTTTCACCCATCGAATCACGTTTGGGGACTAATCATCCGATACTATCAGGTGTACCTGGCGAAAGCTGACGAGCGAATCGGTATGCAAATCCGAATTTTCGAACCTGGGTCTGATACATTCCAACATGTTATAGATCAAATCTCGGCTTGTACATTGAAAGAAAATTTGTTACCGGAAGTAGATACTGAAAGATCCATAATAACCACCCCAACCAAAAACCCTAAATTGAAAGTCATATTGATGACATCACTAAGTCCTGGGTATTATGAGAATCTGCAGACAATATATTGGGAACATCCGACTATAAACGGAGATTTAGTTGGAGTTTATCAACCGAGCCATGAGATGTTTCAACAATCAGAAAAGCAGTTACATAACCGAAAGGCATTGGCCGAAATGTATTTACTTAGTATGAGTGATGTGTTGGTTACAAGCGCTTGGTCGACGTTTGGATATGTGGCTCAAGGTCTTGGAGGGTTGAGGCCATGGATTCTTATAAAGGCCGAAAACCAAACCGTGCCGGTCCCTCCTTGTCAGCAAGTTATGTCGATGGAGCCGTGCTTTCATGCTCCGCCGTTTTATGATTGCAAAGCGAAAAAAGGGATTGACACGGGTGAAGTTGTGCCGTATGTTAAACACTGTGAGGATATGAGTTGGGGACTTAAGGTTATTGATGAAAATGATCATTGA 1731 42.06 MDPIPFRRRSSVSSSPKNPTDRSTAAIGSSFSMSVSKSGFGSSPMKLTKVLGCCLIALPLVVFLTLVLRNPHADQTKGFPEARVLERINQPNSTSSPSSSKEDKFISGLLSPGFDESSCLSRYQSSSYRKTSPYKPSPYLISRLRSYEQLHKQCGPGTRPYNEALKILKSGHSVTSISTECKYVVWMSFSGLGNRILTVASSFLYALLTNRVLLIDPGKDIPDLFCEPFPETSWLLPDNYPLKKHFDEFGQNFGHCYGNMLKRNIINTSVESPYSYLYLHLAHDYNEHDKLFFCDEDQAFLEKVPWLILKTNNYFVPSLFLMPSFEQELSQLFPRKDTVFHHLGRYLFHPSNHVWGLIIRYYQVYLAKADERIGMQIRIFEPGSDTFQHVIDQISACTLKENLLPEVDTERSIITTPTKNPKLKVILMTSLSPGYYENLQTIYWEHPTINGDLVGVYQPSHEMFQQSEKQLHNRKALAEMYLLSMSDVLVTSAWSTFGYVAQGLGGLRPWILIKAENQTVPVPPCQQVMSMEPCFHAPPFYDCKAKKGIDTGEVVPYVKHCEDMSWGLKVIDENDH 576
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 8118397 8120246 + Conep13aG0096700.1 Cone13ag0939 451326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag0939 576 Gene3D - 368 518 - -
Cone13ag0939 576 MobiDBLite consensus disorder prediction 1 26 - -
Cone13ag0939 576 FunFam Galactoside 2-alpha-L-fucosyltransferase 179 230 - -
Cone13ag0939 576 Pfam Xyloglucan fucosyltransferase 92 544 IPR004938 GO:0008107(InterPro)|GO:0016020(InterPro)|GO:0042546(InterPro)
Cone13ag0939 576 MobiDBLite consensus disorder prediction 8 26 - -
Cone13ag0939 576 Gene3D - 178 227 - -
Cone13ag0939 576 MobiDBLite consensus disorder prediction 87 105 - -
Cone13ag0939 576 PANTHER FUCOSYLTRANSFERASE 2-RELATED 43 573 IPR004938 GO:0005794(PANTHER)|GO:0008107(InterPro)|GO:0009969(PANTHER)|GO:0016020(InterPro)|GO:0042546(InterPro)
Cone13ag0939 576 MobiDBLite consensus disorder prediction 86 105 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0939 Cone-Chr13:8118397 Cone2ag0834 Cone-Chr2:34356174 1.26E-239 dispersed
Cone13ag0938 Cone-Chr13:8115929 Cone13ag0939 Cone-Chr13:8118397 1.37E-306 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag0939 K13681 - csv:101216541 763.837