Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag0990 ATGACGAGTAGCGACGTGAAGCTTCTGGGTGCGTGGGCTAGCCCATTTGTGATGAGGCCTAGAGTTGCTCTCAACATCAAATCCGTGAGCTACGAATTTCTTGAGGAATCATTTGGTTCTAAGAGCGCTCTTCTTCTTCAATCCAACCCCGTTTACAAAAAAATCCCTGTTCTCATCCATAAAGACAAACCCGTCTGTGAATCTCTCATCATCGTTCAGTACATCGACGAGGTCTGGTCCTCTGGCCCCTCATTCCTTCCGTCTGATCCGTACGACCGCGCGACTGCTCGATTCTGGGCTGCTTATGTTGATGACAAGTGGTTTCCATCCATGAGAGGCATAGCAGCAGCTCAAACTGAAGAAGCAAAGAAGGAACTGATAAGTCAAGTAGAAGAAGGGCTGGCACTCTTAGAAGAAGCATTTGTGAAGGCCAGCAAAGGCAAGCCGTTCTTCGGCGGGGACCACATCGGCTACCTTGACATCGCGTTCGGGTCCTACTTGGGCTGGCTTAGAGTGACCGAGAAATTCAATGGGCAGAAGTTTATAGATGAATCCAAGACTCCTTCTCTTGCGAAATGGGTTGAGGCTTTCTCTTCACACCCTGCTGTGAAAGATGTCTTGCCTGAGACTGATAAGCTTGCTGAGTTTGCTAAGGTCCTTCAAGCCAGGATGAAGGCAGGCCCTCCTAAGTAG 693 49.21 MTSSDVKLLGAWASPFVMRPRVALNIKSVSYEFLEESFGSKSALLLQSNPVYKKIPVLIHKDKPVCESLIIVQYIDEVWSSGPSFLPSDPYDRATARFWAAYVDDKWFPSMRGIAAAQTEEAKKELISQVEEGLALLEEAFVKASKGKPFFGGDHIGYLDIAFGSYLGWLRVTEKFNGQKFIDESKTPSLAKWVEAFSSHPAVKDVLPETDKLAEFAKVLQARMKAGPPK 230
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 8364792 8367832 - Conep13aG0102000.1 Cone13ag0990 451377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag0990 230 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Cone13ag0990 230 Pfam Glutathione S-transferase, C-terminal domain 121 196 - -
Cone13ag0990 230 Pfam Glutathione S-transferase, N-terminal domain 5 77 IPR004045 -
Cone13ag0990 230 Gene3D - 86 230 - -
Cone13ag0990 230 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 220 IPR010987 -
Cone13ag0990 230 FunFam Glutathione S-transferase GSTU6 1 86 - -
Cone13ag0990 230 CDD GST_N_Tau 6 79 - -
Cone13ag0990 230 SUPERFAMILY GST C-terminal domain-like 85 219 IPR036282 -
Cone13ag0990 230 FunFam Glutathione S-transferase U9 86 226 - -
Cone13ag0990 230 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 218 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Cone13ag0990 230 CDD GST_C_Tau 90 220 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Cone13ag0990 230 SUPERFAMILY Thioredoxin-like 5 108 IPR036249 -
Cone13ag0990 230 SFLD Main.3: Omega- and Tau-like 2 226 IPR045073 -
Cone13ag0990 230 Gene3D Glutaredoxin 1 85 - -
Cone13ag0990 230 SFLD Glutathione Transferase (cytosolic) 2 226 IPR040079 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0990 Cone-Chr13:8364792 Cone14ag0993 Cone-Chr14:8223914 4.29E-57 dispersed
Cone16ag0163 Cone-Chr16:1003406 Cone13ag0990 Cone-Chr13:8364792 4.50E-49 transposed
Cone13ag0990 Cone-Chr13:8364792 Cone19ag0984 Cone-Chr19:7425941 2.05E-157 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag0990 K00799 - mdm:139193209 356.295