Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag0997 ATGGATGAATGGAGGAAGGCTTCGAGATCGAGGACGAGATCGGGAGTTCGGATTCCATCGTTGGAGGAGAGTCGTTCTTCTAAGACGGTTCGACTCGGCCGACTCCAGCCTCAGGCGCCTGGTAATCGCACTATTTACTGCAATGATCGCGAGGCAAATCTCCTTACAAGATTCAAGGGGAATTCAGTATCAACGACAAAATACAACTTTTTCACTTTCTTTCCAAAAGGGCTGTTTGAACAGTTCCGTCGGGTAGCTAATCTCTACTTTCTTACAATCGCAACTCTATCTACAACGCCTATGAGTCCTGTGAGTCCAATAACAAACGTGATTCCTCTAAGTCTGGTTCTTATTGCATCTCTAATTAAAGAAGCATTTGAGGACTGGAAACGGTATCAGAATGATATGGCCATAAATAATAATCTTGTTGATGTTTTGCAAGATCAGAAGTGGAAGAGTGTTCCTTGGAAAATGTTGCAGGTTGGAGATATTGTCAGGGTTAAGCAGGATGGGTTCTTCCCTTCAGATCTACTTTTTATTGCTAGTACAAATCCAGATGGTGTCTGCTACATTGAGACTTCTAATTTGGATGGAGAGACAAATTTGAAGATTAGAAAGGCACTGGAAAAGACCTGGGATTACATTACTCATGAGAAAGCTTCTGAATTTGAAGGTGAAGTACAATGTGAGCAACCAAATAATTCCTTGTATACCTTCACTGGAAACCTTGTTATTCAGAATCACACATTGCCCCTCAGTCCAAATCAGCTTCTATTACGAGGATGCAGTCTCAGGAACACCGAGTACATTGTAGGAGTAGTTATCTTTACAGGTCATGAAACAAAGGTTATGATGAATGCTATGAATGTCCCTTCAAAAAGAAGTACATTGGAGAAGAAACTTGACAAACTTATACTCACACTTTTTGCCACTCTCTTTGCTATGTGTGTGATTGGATCCATTGGCAGTGGCTTCTTTATAAACCACAAGTACATTTACTTGTCGACTGATAAAGGAACAGAAGGTCAATTCAACCCTAACAATCGAATCCTGGTTGCCACCCTGACTATGTTTACCTTAATCACTCTGTACTCAACAATTATTCCTATTTCTCTGTATGTTTCCATTGAGATGATTAAATTCATTCAGTCAGCTCAGTTTATCAACAAGGACTTAGACATGTACCATGCTGAAAGCAACACTCCTGCATTGGCCAGGACCTCCAATTTGAATGAGGAACTTGGACAGGTGGAATACATATTTTCCGATAAAACGGGGACTCTTACTAGAAATTTAATGGAGTTTTTTAAGTGCTCAATTGGTGGAGAGGTCTACGGTACTGGTATCACTGAAATGGAGAGGGGAGTTGCCCAACGAAGCGGTATGAAAGTTGAGGGGCAGATAATAGCCAATTTAGTGCATGAAAAAGGATTTAATTTTGATGATGATCGGCTAATGCGAGGAGCATGGAAGAATGAGCCTAATTCTGATCTTTGCAAGGAATTCTTCAGATGCCTTGCTATATGTCACACTGTGCTTCCTGAGGGTGAGGAATCTCCAGAAAAAATCAGATATCAAGCAGCATCACCAGATGAGGCTGCTTTGGTAACAGCTGCAAAAAATTTTGGCTTCTTCTTTTACAGGCGTTCACCTACTACGATCTATGTCCGTGAATCTCATGTTGAGAAGATAGGTAAAATCCAAGAAGCATCTTATGAGGTTCTCAATGTCCTTGAATTTAATAGTACAAGAAAGCGCCAGTCCGTGGTATGTCATTATACAGATGGGAGGCTTGTCTTGTACTGCAAGGGTGCTGATAATGTCATATATGAGAGATTGGCTGTTGGAAATGATGACTTAAAGAAAGTAACTAGGGAGCATCTGGAGCAATTTGGTGCTGCTGGCTTAAGAACCCTTTGCCTGGCTTATAGAGATTTGAGTCCTGAGATTTATGAAAGCTGGAACGAGAAATTCATGCAGGCTAAATCCTCTCTACGAGACCGTGAAAAGAAGTTAGATGAGATTGCAGAACTCATAGAAGTTGATCTAAATCTGATTGGTTGTACTGCCATAGAAGACAAGCTTCAAGAAGGAGTACCAGACTGTATACAGACACTTGCCAGAGCTGGTATTAAGCTTTGGGTGTTAACAGGGGACAAGATGGAAACAGCAATTAATATCGCTTATGCATGTAATCTAATCAACAATGAAATGAAACAGTTTATCATCAGTTCAGAAACTGATGCAATCAGGGAGGTTGAAAGCAAGGGCGACCAAATAAAAATTGCACGCTTTATCAGAGAAGAAGTCAAGGGGGAATTGAAAAGGTCCCTTGAGGAAGTAAAAAGGCATTTGCGCTCTGCTTCCGGACCAAAATTAGCACTTGTAATAGATGGAAAGTGTTTGATGTACGCATTGGACCCAAGTCTGAGAGTGATCCTACTTGACCTGAGCTTGAACTGTAATTCAGTTGTTTGCTGCCGAGTATCTCCTCTACAGAAAGCACAGGTCAACATAGTCAACTTACCTGCAGCTATATTTACAACAGAACTTATGAGACTTAAATATATTTATCTATAA 2580 40.7 MDEWRKASRSRTRSGVRIPSLEESRSSKTVRLGRLQPQAPGNRTIYCNDREANLLTRFKGNSVSTTKYNFFTFFPKGLFEQFRRVANLYFLTIATLSTTPMSPVSPITNVIPLSLVLIASLIKEAFEDWKRYQNDMAINNNLVDVLQDQKWKSVPWKMLQVGDIVRVKQDGFFPSDLLFIASTNPDGVCYIETSNLDGETNLKIRKALEKTWDYITHEKASEFEGEVQCEQPNNSLYTFTGNLVIQNHTLPLSPNQLLLRGCSLRNTEYIVGVVIFTGHETKVMMNAMNVPSKRSTLEKKLDKLILTLFATLFAMCVIGSIGSGFFINHKYIYLSTDKGTEGQFNPNNRILVATLTMFTLITLYSTIIPISLYVSIEMIKFIQSAQFINKDLDMYHAESNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEVYGTGITEMERGVAQRSGMKVEGQIIANLVHEKGFNFDDDRLMRGAWKNEPNSDLCKEFFRCLAICHTVLPEGEESPEKIRYQAASPDEAALVTAAKNFGFFFYRRSPTTIYVRESHVEKIGKIQEASYEVLNVLEFNSTRKRQSVVCHYTDGRLVLYCKGADNVIYERLAVGNDDLKKVTREHLEQFGAAGLRTLCLAYRDLSPEIYESWNEKFMQAKSSLRDREKKLDEIAELIEVDLNLIGCTAIEDKLQEGVPDCIQTLARAGIKLWVLTGDKMETAINIAYACNLINNEMKQFIISSETDAIREVESKGDQIKIARFIREEVKGELKRSLEEVKRHLRSASGPKLALVIDGKCLMYALDPSLRVILLDLSLNCNSVVCCRVSPLQKAQVNIVNLPAAIFTTELMRLKYIYL 859
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 8392632 8399459 + Conep13aG0102800.1 Cone13ag0997 451384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag0997 859 ProSitePatterns E1-E2 ATPases phosphorylation site. 423 429 IPR018303 -
Cone13ag0997 859 SUPERFAMILY Calcium ATPase, transmembrane domain M 52 415 IPR023298 -
Cone13ag0997 859 Pfam haloacid dehalogenase-like hydrolase 642 753 - -
Cone13ag0997 859 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 428 649 IPR023299 GO:0000166(InterPro)
Cone13ag0997 859 Gene3D - 122 288 - -
Cone13ag0997 859 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 28 837 - GO:0005802(PANTHER)|GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0048194(PANTHER)|GO:0140326(PANTHER)
Cone13ag0997 859 FunFam Phospholipid-transporting ATPase 119 288 - -
Cone13ag0997 859 NCBIfam phospholipid-translocating P-type ATPase 58 838 IPR006539 GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro)
Cone13ag0997 859 Pfam Phospholipid-translocating ATPase N-terminal 45 109 IPR032631 -
Cone13ag0997 859 Gene3D - 448 688 IPR023299 GO:0000166(InterPro)
Cone13ag0997 859 Pfam Cation transport ATPase (P-type) 509 612 - -
Cone13ag0997 859 FunFam Phospholipid-transporting ATPase 529 684 - -
Cone13ag0997 859 Gene3D - 689 794 IPR023214 -
Cone13ag0997 859 Pfam E1-E2 ATPase 142 330 - -
Cone13ag0997 859 SUPERFAMILY HAD-like 409 751 IPR036412 -
Cone13ag0997 859 SUPERFAMILY Calcium ATPase, transduction domain A 140 284 IPR008250 -
Cone13ag0997 859 FunFam Phospholipid-transporting ATPase IC 418 430 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0997 Cone-Chr13:8392632 Cone19ag0872 Cone-Chr19:6833295 1.54E-234 dispersed
Cone12ag0612 Cone-Chr12:5434262 Cone13ag0997 Cone-Chr13:8392632 0 wgd
Cone13ag0997 Cone-Chr13:8392632 Cone19ag0988 Cone-Chr19:7442544 9.04E-22 wgd
Cone13ag0997 Cone-Chr13:8392632 Cone8ag0629 Cone-Chr8:6217396 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag0997 K14802 - csv:101207069 1426.38