Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag1030 ATGGATCTGGAGAATGGAGTCAATCGAAACAAGGTTAAGAAAGATTCATGGAAGACAGTTCTGACTCTGGCTTATCAGAGTTTAGGCGTTGTTTATGGCGATTTAAGCACTTCGCCTCTCTACGTGTTCAGGAATACATTTGCTGAAGACGATATCGAGCACTCAAAGACTAATGAAGAGATCTATGGAGTTTTATCCTTCGTTTTCTGGACACTCACCATTATTCCTCTGATCAAATATGTATTTATTGTGCTCAAAGCTAACGATAATGGCGAGGGAGGGACTTTTGCTCTGTACTCGTTGTTGTGTAGACATGCACGACTCAGCTCGTTGCCTAATATGCAGTCGTCTGATGAAGAGCTCTTTGAGTACAAGAAAGATAGCATGAGTTCACCCTCGGACAAAAGCTTTGGGGCTAAGCTGAAATCCGCATTACAGAAGCGTATGATTTTGCAAAGATCTCTGCTTGTACTGGCATTGATTGGAACTTGCATGGTGATTGGTGATGGCATCCTCACGCCAGCTATTTCAGTACTTTCTGCAGTTTCTGGGCTCGAGTTTACAATGTCGAAGGAGCATCATAAGTATGTAGAAGTCCCAGCTGCTTGCGTAATATTGATAGGGTTGTTCTCCCTTCAACACTTTGGCACCCGCGGGGTTGGATTCTTGTTTGCTCCTATAGTTACAGCTTGGCTCTTCTGCATTAGTGCCATTGGTATGTATAACATTATACACTGGAATCCGAAAGTGTATCAGGCACTTTCTCCTCATTATATGTTTCAGTTTTTAAGGAAGACACGAAGTGGAGGTTGGATGTCACTAGGTGGAATTTTATTGTGTATTACCGGTTCTGAAGCAATGTTTGCTGACCTTGGGCACTTTTCACAATGCTCAATCAAGATTGCTTTTGCCTTCATAGTTTATCCATCTTTGATTCTAGCTTACATGGGGCAGGCTGCCTATCTATCTCAGCATCATATTATGCCAAATGATTCCCGAATCGGGTTCTATGTATCTGTACCAGAGAAATTGCGTTGGCCAGTTCTGGTAATTGCCATACTCGCTGCTGTAGTAGGAAGCCAAGCCATCATAACTGGAACATTCTCAATCATCAAACAGTGCTCTGCTTTGAGTTGTTTCCCCAGAGTTAAAGTAGTCCATACATCATCAAAAGTTCACGGTCAGATTTATATTCCAGAGATCAACTGGATCTTGATGCTCCTATGCTTAGCTGCTACCGTTGGTTTTCGAGACACAAAGCGCTTGGGAAATGCATCAGGATTGGCAGTTATAACTGTCATGCTGGTAACAACTTGCTTAATGTCTCTAGTTTTAGTCCTATGTTGGAACCAGAGTGTTTTCCTTGCAATCACCTTCACTTTCTTCTTCGGCTCGATAGAGGCTCTCTATTTCTCAGCTTCCCTCATCAAGTTTCTAGAAGGTGCGTGGGTCCCAATTGCCCTAGCTTTCATCTTCCTCCTGATCACGTACATCTGGCACTATGGCACACTAAAAAAATACGAATTTGATGTACAAAACAAGGTCTCTATCAACTGGCTACTCAATCTGGGTCCCAGCCTTGGCTTTGTGCGGGTCCCAGGAATTGGAGTGATACACACTGAACTTGTTACAGGAATCCCGGCCGTCTTCTCACACTTTGTCACTAACCTTCCAGCCTTCCACCAAGTCCTTGTCTTCCTCTGCATAAAATCTGTTCCTGTCCCTCGAGTCAAACCCGAGGAGCGGTTCCTTGTAGGTCGAATTGGCCCGAGAGAATTCAGGCTCTATAGGTGCATCGTCCGGTATGGATATCGAGACATTCAAAAAGATGATTTAGAATTTGAGAAGGATATTGTATGCAGTATTGCAGAGTTTATAAGATCCGAGACTATATCAAATGGAGAATCTGAAAATCACGATGAGAAATTGACAGTCATAGGGTCATGTTCGACTTCAACCCATGAAGATAGGATTCAAATAATAACTGAGGATGAGATCGGCATTGAAAAGGACAGCGGAGATTTAGCCAGCACCTCGGAGGTGAAGGAGGTTAAGTCCCCACCATCGCATGTTGTTCAAAGACGGAGAAAGGTCAGATTTCTTCTACCGGAAAACCCAGAAGTTGATACGAGGAGAATGGGGGAATTGCAAGAGTTAATGGAAGCAAGGGATGTGGGGGTTGCGTACATTATAGGACGGTCACATATGAGGGCAAAACCGGGTTCGAGCAAATTGAGAGAGCTTGTGATAAATTATGGGTACGAGTTTTTGAGGAGAAATAGCAGAGAGCTTAGCTCTCCTATGAGTTTACCACATGCATCTACAATTGAAGTAGGGATGATGTACAATGTTTGA 2355 43.4 MDLENGVNRNKVKKDSWKTVLTLAYQSLGVVYGDLSTSPLYVFRNTFAEDDIEHSKTNEEIYGVLSFVFWTLTIIPLIKYVFIVLKANDNGEGGTFALYSLLCRHARLSSLPNMQSSDEELFEYKKDSMSSPSDKSFGAKLKSALQKRMILQRSLLVLALIGTCMVIGDGILTPAISVLSAVSGLEFTMSKEHHKYVEVPAACVILIGLFSLQHFGTRGVGFLFAPIVTAWLFCISAIGMYNIIHWNPKVYQALSPHYMFQFLRKTRSGGWMSLGGILLCITGSEAMFADLGHFSQCSIKIAFAFIVYPSLILAYMGQAAYLSQHHIMPNDSRIGFYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALSCFPRVKVVHTSSKVHGQIYIPEINWILMLLCLAATVGFRDTKRLGNASGLAVITVMLVTTCLMSLVLVLCWNQSVFLAITFTFFFGSIEALYFSASLIKFLEGAWVPIALAFIFLLITYIWHYGTLKKYEFDVQNKVSINWLLNLGPSLGFVRVPGIGVIHTELVTGIPAVFSHFVTNLPAFHQVLVFLCIKSVPVPRVKPEERFLVGRIGPREFRLYRCIVRYGYRDIQKDDLEFEKDIVCSIAEFIRSETISNGESENHDEKLTVIGSCSTSTHEDRIQIITEDEIGIEKDSGDLASTSEVKEVKSPPSHVVQRRRKVRFLLPENPEVDTRRMGELQELMEARDVGVAYIIGRSHMRAKPGSSKLRELVINYGYEFLRRNSRELSSPMSLPHASTIEVGMMYNV 784
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 8573063 8578703 - Conep13aG0106100.1 Cone13ag1030 451417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag1030 784 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 11 784 IPR003855 GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(InterPro)|GO:0016020(PANTHER)|GO:0071805(InterPro)
Cone13ag1030 784 Pfam K+ potassium transporter C-terminal domain 533 782 IPR053952 -
Cone13ag1030 784 Pfam K+ potassium transporter integral membrane domain 23 521 IPR053951 -
Cone13ag1030 784 NCBIfam potassium uptake protein 23 784 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag1030 Cone-Chr13:8573063 Cone5ag0147 Cone-Chr5:624725 0 dispersed
Cone9ag0365 Cone-Chr9:1619204 Cone13ag1030 Cone-Chr13:8573063 2.33E-166 transposed
Cone11ag0124 Cone-Chr11:557052 Cone13ag1030 Cone-Chr13:8573063 0 wgd
Cone13ag1030 Cone-Chr13:8573063 Cone16ag0914 Cone-Chr16:9393558 0 wgd
Cone13ag1030 Cone-Chr13:8573063 Cone19ag1020 Cone-Chr19:7621060 0 wgd
Cone13ag1030 Cone-Chr13:8573063 Cone2ag0141 Cone-Chr2:749211 0 wgd
Cone13ag1030 Cone-Chr13:8573063 Cone8ag0650 Cone-Chr8:6474351 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag1030 K03549 - vvi:100251966 1212.98