Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag1084 ATGTCGAAGCCATGGAGTGGTATCGGAGCTTGGGCGGCGGAGGCGGAGCGAGCAGAAGAAGAAGAACGTGAGGCAGCAGCGGCGGTGGCGGCTTCACAAGTTGAGTCTCAGAGCTTTCCGAGTCTTAAGGAAGCCGCTGTGAGCGCGAAACCTAAGAAGAAGAAAATGACGCTGTCGGAGTTTACGATGGGAAGCTATAAGAATTCTAGCGCCGGAAGTCTTATCAATGAGAACAAAGGCTTGACGACGGAGGAGATGCTCCGCCTTCCGACAGGTCCGAAGGAAAGGTCCGCAGAGGAAATGCAGTATAATCGACTAGGAGGTGGATTTTCATCATATGGAGGGCGTTCAGGTCCGTCTCAGGGCCGTATGAGGGACCGTGAAGAGAGCGGTGGGTCTTGGGGCGGAGGTGGAAGAAGATCCTACGGTGGATTTGACGATGAACGTGGAGGTCCTCCTTCTAGGGTTTCTGATTTTGATCAACCTTCTAGGGCGGATGAGGTTGATAACTGGGCAGTGGCGAAGAAATCTCTCCCTGCTTTTGATTCTGGTCGTCAAAATCGTTATGGATCGCTTGGTGGTGGTGGTATGGGCGGTGGAGGAGGAGGAGGAGGCTTTTCTAGGGCTGATGAGGTTGACAATTGGGCTAATGGGAAAAAACCTCCTCCTCCTACTAGATCTTCCACATTTGGTTCTGGTTTTCGTGATTCTGCTGAGCCTGATCGTTGGAGTAGAGGAGGAGGAGGATCCCGTGAGGATGAACGTGAAAGGCCGAGATTGATTTTGGATCCTCCAAAAGGCAATGTGGGTCAGAATGAATCTGAGCAAAAGGTGAAATCGAACAAGCCTAATCCATTTGGGGCTGCAAAGCCTAGGGAAGAAGTTCTGGCTGAGAAGGGGTTGGATTGGAAAAAACTGGACTTAGAAATTGAGGCCAAAAAGACGAGTAGGCCTACTAGCTCTCATTCAAGCAGGCCATCCAGTGCGCAGTCAAGCCGGTCTGTGACTCAAGGCTTGCAGGGGTTAGAAAATGTGGTGAGGCCGACAAGGCCAAAGATCAATCCATTTGGGGATGCCAAACCTAGAGAAGTTTTGCTGGAGGAGAAAGGCAAGGATTGGCGAAAGATTGATCAACAACTCGAGCGTCGAGGTGTTTACAGGCCGGAAGCAGAGGAGGAAAAGATTTTGAAACAAGAAATAGATAATTTAACGGAAGAGCTTGAGAAAGAAGCTGCAAACAAGGGACCTGTATCGGAGTCAGCTGGAGATCAACCTAATCTACATGACATAATTGTTCTGAAAGAAAGAGAACTAGAGATTCTGAGCCATGATCTAAATGAAAAAGTTCGTTTCGTGCAGAAACCATTTGAAAGGCCCAGCTCTGGAGCTGGTAGGGCCACTGGTTTTCTGGACAGACCATCTTCTCAATCTGGGTCGTTTGATGAATCCAGAAGCTTCGAGCCTATGGATAGGCCTAGATCGCGTGGTCTAGGAGATGCATGGAGTAGGCCCTTCGAAGACCAAAGAGGATTTCAAGGTGGCAATAATAGAGGTTTTCTTGGCAACAGAGATTCAGATAGGTCGAGATCGAGGGATCGGTGGTGA 1605 49.47 MSKPWSGIGAWAAEAERAEEEEREAAAAVAASQVESQSFPSLKEAAVSAKPKKKKMTLSEFTMGSYKNSSAGSLINENKGLTTEEMLRLPTGPKERSAEEMQYNRLGGGFSSYGGRSGPSQGRMRDREESGGSWGGGGRRSYGGFDDERGGPPSRVSDFDQPSRADEVDNWAVAKKSLPAFDSGRQNRYGSLGGGGMGGGGGGGGFSRADEVDNWANGKKPPPPTRSSTFGSGFRDSAEPDRWSRGGGGSREDERERPRLILDPPKGNVGQNESEQKVKSNKPNPFGAAKPREEVLAEKGLDWKKLDLEIEAKKTSRPTSSHSSRPSSAQSSRSVTQGLQGLENVVRPTRPKINPFGDAKPREVLLEEKGKDWRKIDQQLERRGVYRPEAEEEKILKQEIDNLTEELEKEAANKGPVSESAGDQPNLHDIIVLKERELEILSHDLNEKVRFVQKPFERPSSGAGRATGFLDRPSSQSGSFDESRSFEPMDRPRSRGLGDAWSRPFEDQRGFQGGNNRGFLGNRDSDRSRSRDRW 534
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 8813003 8816291 - Conep13aG0111600.1 Cone13ag1084 451471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag1084 534 MobiDBLite consensus disorder prediction 61 80 - -
Cone13ag1084 534 MobiDBLite consensus disorder prediction 451 534 - -
Cone13ag1084 534 Pfam Plant specific eukaryotic initiation factor 4B 1 518 IPR010433 GO:0003743(InterPro)
Cone13ag1084 534 MobiDBLite consensus disorder prediction 238 262 - -
Cone13ag1084 534 Coils Coil 390 413 - -
Cone13ag1084 534 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 449 IPR010433 GO:0003729(PANTHER)|GO:0003743(InterPro)|GO:0003743(PANTHER)
Cone13ag1084 534 MobiDBLite consensus disorder prediction 1 361 - -
Cone13ag1084 534 Coils Coil 15 35 - -
Cone13ag1084 534 MobiDBLite consensus disorder prediction 292 318 - -
Cone13ag1084 534 MobiDBLite consensus disorder prediction 484 502 - -
Cone13ag1084 534 MobiDBLite consensus disorder prediction 319 343 - -
Cone13ag1084 534 MobiDBLite consensus disorder prediction 142 171 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag1084 Cone-Chr13:8813003 Cone19ag1074 Cone-Chr19:7844600 1.04E-300 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag1084 K03258 - csv:101206526 580.482