Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag1100 ATGGCTACTGTATTTTCGCACGGATCAAACCTCGTTCTCCTTCCATTTCCAGACCATTTCAAAACGCCAACTCCCTTCCTTCACCGGCACAATTATCATAGTTTCTCCTACCACCATCACCACCGCAAATCATTTCTTCGTGGCTCGCTTTCTGTGGCTAGGTTTGGGTTCAAACAGGGTTTCTTCCCTGACCCAGACAGTGCGGAGGGCTTAGTTAGGGACATGCTTGGCAAAACTGAGAGCTTAATTTATACGATTGCGGATGCTGCAGTTTCGGCTTCTGCTTCCTCTGAAGTTGTTGGAACTTCGAAACAGAGTAACGATTGGTTTTCTGGGATTACTAATTACATGGAAACTGTTCTCAAGATTCTAAAGGATGGACTTTCTACTGTACATGTTCCTTATGCTTATGGATTTGCTATTATACTCCTCACTGTTCTTGTTAAGGCAGCCACATTTCCCTTGACGAAGAAACAGGTTGAATCTGCGATGTCTATGCGATCTTTGCAACCTCAAATAAAGGCTATTCAACAACGGTATGCTGGGAATCAGGAGAGAATTCAACTTGAGACTGCTCGATTATATAAGTTAGCTGGCATAAACCCGTTTGCTGGGTGCCTGCCTACACTCGTTACAATTCCAGTGTGGATTGGACTATATAGGGCTCTCTCGAATGTGGCAGATGAGGGACTCCTTACTGAAGGTTTCTTCTGGATACCTTCCCTGGCCGGACCAACTACAGTAGCCGCTCGTCAAAGTGGCAGTGGTATCTCTTGGCTTTTTCCATTCATAGACGGTCAACCTCCTCTTGGATGGTCAGATACTTTGGCATATCTTGTCTTGCCTTTGTTGCTTGTCATCTCCCAGTACATCTCAGTCCAAATAATGCAATCATCACAGAGTAATGATCCAAACATGAAGACTTCTCAGGCCCTCACAAAGTTGCTCCCTCTAATGATCGGTTATTTCGCTCTTTCAGTTCCTTCCGGTCTAAGCCTCTATTGGTTCACTAACAACATCCTGAGCACAGCCCAACAAGTATGGCTACAAAAGTTAGGAGGTGCAAAAGTCCAAGTGAAGGAATTAAGTGATGATGTCATCAAGCAAGACCAGTTAGAGATTCCGAAATTATCCATAGTTGAACCAAAAATCAAAACGGAATCCAAACAAGCAGAGAAATTGACCTCTGATGGGCTACGACCTGGTGAAAGATTTAGACAGCTAAAAGAGCAAGAGGCAAAGAAAAGACGTGAGCGAGAAGAAAAAGAAAAGAGGAAAGCTGAAGAAGCAGCAGCAGCAGAAGCAGAAGCGCAAACAAATCAAATGACAAGTGGAAGTAATCTTGTTGTTGAAAGAAGTGAAATTCATTCTGAGACTAACAACAATAAGTCCTCAAATGTTGGGGTCAACGGAAATATATCCAGGGAGGAATCAAACAAAGATGAGAAAACAACAACCGCATTTAAAACTGAAGTTTCTGTTATTAACAACAGGGATGAAGCATTGCAGTCCTCTCAGCTTACAGAGAAAGCAGTAGCTGAAGTGTATTCTACTTCAACCACTACGGATGTCTCCATTTCAGGAGATAACAAAGATCAAGCTGGACAAGAGTGA 1614 43.12 MATVFSHGSNLVLLPFPDHFKTPTPFLHRHNYHSFSYHHHHRKSFLRGSLSVARFGFKQGFFPDPDSAEGLVRDMLGKTESLIYTIADAAVSASASSEVVGTSKQSNDWFSGITNYMETVLKILKDGLSTVHVPYAYGFAIILLTVLVKAATFPLTKKQVESAMSMRSLQPQIKAIQQRYAGNQERIQLETARLYKLAGINPFAGCLPTLVTIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTVAARQSGSGISWLFPFIDGQPPLGWSDTLAYLVLPLLLVISQYISVQIMQSSQSNDPNMKTSQALTKLLPLMIGYFALSVPSGLSLYWFTNNILSTAQQVWLQKLGGAKVQVKELSDDVIKQDQLEIPKLSIVEPKIKTESKQAEKLTSDGLRPGERFRQLKEQEAKKRREREEKEKRKAEEAAAAEAEAQTNQMTSGSNLVVERSEIHSETNNNKSSNVGVNGNISREESNKDEKTTTAFKTEVSVINNRDEALQSSQLTEKAVAEVYSTSTTTDVSISGDNKDQAGQE 537
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 8887270 8890264 - Conep13aG0113200.1 Cone13ag1100 451487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag1100 537 Coils Coil 405 438 - -
Cone13ag1100 537 PANTHER OXA1 32 421 IPR001708 GO:0009535(PANTHER)|GO:0010027(PANTHER)|GO:0016020(InterPro)|GO:0032977(PANTHER)|GO:0032977(InterPro)|GO:0051205(PANTHER)|GO:0072598(PANTHER)
Cone13ag1100 537 MobiDBLite consensus disorder prediction 388 486 - -
Cone13ag1100 537 MobiDBLite consensus disorder prediction 516 537 - -
Cone13ag1100 537 NCBIfam membrane protein insertase YidC 137 351 IPR028055 -
Cone13ag1100 537 CDD 5TM_YidC_Alb3 138 351 IPR047196 -
Cone13ag1100 537 MobiDBLite consensus disorder prediction 436 474 - -
Cone13ag1100 537 MobiDBLite consensus disorder prediction 388 432 - -
Cone13ag1100 537 Pfam 60Kd inner membrane protein 137 351 IPR028055 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag1248 Cone-Chr11:9323512 Cone13ag1100 Cone-Chr13:8887270 4.73E-143 dispersed
Cone13ag1100 Cone-Chr13:8887270 Cone18ag0342 Cone-Chr18:1681920 2.19E-140 dispersed
Cone13ag1100 Cone-Chr13:8887270 Cone19ag1088 Cone-Chr19:7916613 0.00E+00 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag1100 K03217 - cit:102630966 586.26