Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag1130 ATGGAAGTGGAAATATTGGAAGAATTCAAGAAGAGCGGGTTTACGCTCGACGAACAAGACGAAGTTCTCAACAAATGTGTTACTTTCTGCACCAATTACAATCTCAAGCTGTCAGATCTGGTTTCCAGCTGGGTGGTTTACTATCTCAACAGGCAATTGGATGAGTCAGTGGTGTGCGATGCACAGATGGATGGGTTTTGTCTGCACCTACAAAATGAGCAAAGGGAAGCTGTTATAAGAGAGGAAGCGAATTTGCATATTTACTCCAGCAAAGATGTGGACATGATCTTAAACGACGATAATGAAGAATCTAAAGAAGAAATACTTCAGACTCCAACAGGGAAATCTCACACTCTCTATTCAGAGCCATTTGATTCATCACCTCACATGAATGGGGCCATATTTTCCTCTGAAAGGTTAAGACATGTGACCCCCTTCGGACAAAGAACTGATAAGTTGGCTGTGAAAGTCAGCATTAATCGTATGCCTGATACAAAGATGGTAAAAATGGAAGATGATGATGAGCTTAATGAGGATGACATTATCAGGAAAGTTCCTACACCCAAAAGGTGTTCCTTGGTAGTCCATGAGTCAGGAGCTCAACCACGTTGTAGGCACACTACTGCACTTGTTGCATCAGGGCAGTACGAAGAACCAATTGATCCTTCTGTTGCTTCACAGAAAAGCGTATTTACAGTTGGCATGATCTGTAACGAAGGAGAAGGCCGTTTGAATGATAAGTCAACGTTATTGCAGAGCAGGTTAACAATTATCTACTTGACTGCTCTCTTTGATCTGTCCATTGCAGTGTTGAGCATTCTGGAGGGCAATGTCGTGGGTATCGAAGGGCATAATCCTAGTGGACACTGTTTGATTGCATCAAAACTGGTAGATGCTGTTCCTTTGTCTGTCTCTGCTGATGTGAATTTGCATCCAGCAAGCCTTGGATTCGGAGATCGAGCCAACTGA 969 42.93 MEVEILEEFKKSGFTLDEQDEVLNKCVTFCTNYNLKLSDLVSSWVVYYLNRQLDESVVCDAQMDGFCLHLQNEQREAVIREEANLHIYSSKDVDMILNDDNEESKEEILQTPTGKSHTLYSEPFDSSPHMNGAIFSSERLRHVTPFGQRTDKLAVKVSINRMPDTKMVKMEDDDELNEDDIIRKVPTPKRCSLVVHESGAQPRCRHTTALVASGQYEEPIDPSVASQKSVFTVGMICNEGEGRLNDKSTLLQSRLTIIYLTALFDLSIAVLSILEGNVVGIEGHNPSGHCLIASKLVDAVPLSVSADVNLHPASLGFGDRAN 322
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 8984052 8986549 + Conep13aG0116200.1 Cone13ag1130 451517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag1130 322 Pfam DNA polymerase alpha subunit B N-terminal 4 51 IPR013627 -
Cone13ag1130 322 Gene3D - 1 66 IPR043034 -
Cone13ag1130 322 Pfam DNA polymerase alpha subunit B, OB domain 221 297 IPR054300 -
Cone13ag1130 322 FunFam DNA polymerase alpha subunit B 1 74 - -
Cone13ag1130 322 PANTHER DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT 4 306 IPR016722 GO:0005658(PANTHER)|GO:0006270(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag1130 Cone-Chr13:8984052 Cone19ag1109 Cone-Chr19:7999790 3.79E-170 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag1130 K02321 - rcu:8278457 360.147