Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag1183 ATGGTGGGGGCAGAGTGTGAGATAATCTCCCCGGACGAGGCGGAGTCTTCCTTACAATCCGAGCAGCAGCAGAAAAACCTTCCCTTCACAACCCTCGGAAGACAATCCTCAATCTACTCCCTCACCCTCGATGAGTTCCAACACACCCTCTGCGAAAGCGGAAAGAATTTTGGGTCCATGAACATGGACGAGCTCCTCACTTCCATCTGGACCGCTGAAGAAAACCAAGCCGTCAATGGCTCCACCCATCATCCCACCGCCGCACCTGATCACAACAACAATATTACCAGTAATGCCCCTCCGTCACACTTCTCTTTGACCGGCCCGGTCATTGCTGAAAATGGTAGCAATAGTATTGTCAAGCAACCAAGCTTGCCGCGACAGGGCTCGCTTAGTCTCCCTGCACCCCTCTGCCGGAAGACGGTTGATGAGGTCTGGTCTGAGATACATAGAACCGAGCAACAAGAACAACCACAAAGCCATAGTAATGAGAATGTAAATGGGAATGTTCAGAATCCCGAGTCGACGACTCGTCAACCTACATTTGGAGAGATGACGTTGGAAGATTTTCTGATCAAAGCGGGTGTGGTTAGAGAACCGGGTGAGGTGGGAGTAATGAGCCAAGTCCAACCACCTCAGCAACAACAACAATTTAACATTTATCCGAATAGTAACTCTACCGTCGGTGCCGGTTTCATGAGTGGGCCGATAATGGGAGGAGGTGGGGCCGGTACGAGCGGGGGTGTCCCTAGGTTCCAGGCAGTCTCACAGGGAGGTGGCACTGGGATTGGAGATGCTTCCGGGTTTGTTGGAAATGGTAAGAGGAATGGTGTGTATCCACCTCCCGCACCGTTGGCTGCTTGTTACGGGGGAAGAGTTGTGAATGGTGGTGGATATGCGCCCACGCAACCCATTGGGATGCCTAGGCCCGTGAGCCCGGTTTCGCCAGATGGAATGTGTCCGAGTCAGGTTGATAATTCCGGGAGCCAATATGGGTTGGATATGGGTGGGCTTAGAGGGAGGAAGAGGGTCATTGATGGTCCGGTTGAAAAGGTGGTGGAGAGGAGACAAAGAAGGATGATTAAAAATAGGGAGTCAGCTGCTAGGTCAAGAGCTCGAAAACAGGCGTACACAGTAGAGTTAGAAGCAGAGTTAAACCAGCTAAGGAACGAAAATGCTCATCTCAAGCAAGCCCTGACAGAGCTTGAAAGGAAGAGAAAGCAACAGTACTTTGAGGAAATGAAAAAAGTTCCAACAAAGGCTCAGAAAGCTAAGGAGAGACTGCGTGTCTTAAGGAGGAACATGAGTTGCCCATTGTGA 1320 50.91 MVGAECEIISPDEAESSLQSEQQQKNLPFTTLGRQSSIYSLTLDEFQHTLCESGKNFGSMNMDELLTSIWTAEENQAVNGSTHHPTAAPDHNNNITSNAPPSHFSLTGPVIAENGSNSIVKQPSLPRQGSLSLPAPLCRKTVDEVWSEIHRTEQQEQPQSHSNENVNGNVQNPESTTRQPTFGEMTLEDFLIKAGVVREPGEVGVMSQVQPPQQQQQFNIYPNSNSTVGAGFMSGPIMGGGGAGTSGGVPRFQAVSQGGGTGIGDASGFVGNGKRNGVYPPPAPLAACYGGRVVNGGGYAPTQPIGMPRPVSPVSPDGMCPSQVDNSGSQYGLDMGGLRGRKRVIDGPVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAELNQLRNENAHLKQALTELERKRKQQYFEEMKKVPTKAQKAKERLRVLRRNMSCPL 439
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 9204339 9205914 - Conep13aG0121600.1 Cone13ag1183 451570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag1183 439 Coils Coil 371 408 - -
Cone13ag1183 439 Gene3D - 353 404 - -
Cone13ag1183 439 FunFam protein ABSCISIC ACID-INSENSITIVE 5 isoform X1 353 409 - -
Cone13ag1183 439 Pfam bZIP transcription factor 355 407 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone13ag1183 439 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 353 405 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone13ag1183 439 SMART brlzneu 351 415 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone13ag1183 439 MobiDBLite consensus disorder prediction 13 27 - -
Cone13ag1183 439 MobiDBLite consensus disorder prediction 1 27 - -
Cone13ag1183 439 MobiDBLite consensus disorder prediction 150 181 - -
Cone13ag1183 439 CDD bZIP_plant_BZIP46 355 409 - -
Cone13ag1183 439 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 34 419 IPR043452 GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0045893(InterPro)
Cone13ag1183 439 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 358 373 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone13ag1183 439 MobiDBLite consensus disorder prediction 158 181 - -
Cone13ag1183 439 SUPERFAMILY Leucine zipper domain 355 404 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag1087 Cone-Chr12:8900849 Cone13ag1183 Cone-Chr13:9204339 7.73E-46 dispersed
Cone13ag1183 Cone-Chr13:9204339 Cone7ag1373 Cone-Chr7:9924764 4.33E-45 dispersed
Cone13ag1183 Cone-Chr13:9204339 Cone19ag1165 Cone-Chr19:8224294 2.43E-264 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44664 PF13483 Lactamase_B_3 7.10E-20 CL0381 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag1183 K14432 - csv:101209887 513.842