Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone13ag1195 | ATGGAGCTGGAAGCTTCATGGCACCTCAAGTATGTTTACTTTCGTGGTTTATTTGTTTGCTTCTTCCTCATGCTCTCTTTCTTTTACCTCTTGCTTAGGTACTTGGACAAAACAAAGCTTTATTGTAACTGTGAGACTTGTCAAACTTATCTCAAATCAAGTTGGTCGGAGAATTTCGATAATCTTTGTGATTGGTACGCCTTTCTTCTTAAAAAATCACCCACTAAAACCATTCACATACATGTTCTTGGCAACGTTATTACAGCAGACCAAAACAACGTTGAATACATCCTCAAGACAAGATTTGAGAATTACCCAAAAGGCAAGCCCTTCTCCAAGATCCTTGGAGATTTTCTGGGTCGAGGTATCTTCAACGTCGATGGAGATTTATGGAGGTTTCAGAAACACGTGGCTAGTCAAGAGCTTACGAAATACTCCTTGAGGACTTATGCTTTCGAGATTTTCACCGAAGAAATTGAACATCATCTTGTCTCTTTTTTGGCGGAGAAAGAGAATATTGGAGTAGTTTTGGATTTACAAGATGTGTTTAGACGTTTCTCTTTTGATTGTATGTGCAAGTTTCTATTCGGGGTGGACCCGATATCTTTATTAGACTTTTCAGTCCAAATATCGGAGTTCTCGGTAGCGTTCGATTTAGCATCGAAGCTGTCGGCCGAGAGAGCTATGTCGGTTTCACCGATGGTTTGGAAGGTCAAAAGGATGTTAGGTTTAGGGAGTGAAAAGCAATTGAAAGATGCAATCAGCTTGATTGATATCTTCGCTAGAGAAATCATAAGGAACAAACGAAAAATAGGGTTTTCAAACCATAAGGATCTGCTCTCAAGGTTCATGGGTACAATCAATGATGAAAGGTATTTGAGGGATATTATCATAAGCTTCCTATTGGCAGGCCGGGACACGGTGGCTTCCGCCTTGACAAGCTTCTTTTGGCTACTTTCAAACCATCCTCGTGTCGAGGAGGCAATTCTACGCGAGGCCGATCGGGTCATCGGAAATGACAAAGATGTCCTTATAAATTTTGAACAACTACGTGAACTTCACTACTTACAAGCATCGATGTATGAGAGTATGAGACTCTACCCACCGATTCAATTCGATTCAAAGTTTTGCGAGGAAGACGATGTTTTGCCTGACGGAACGTTCGTAAAGAGAGGAACTAGGGTTACTTACCACCAATATGCAATGAGTCGGATCGAAGAGATTTGGGGTCCAGACTGTTTGGAATTCAAGCCTGAACGATGGTTAAGAGATGGAATCTTCTTTTCAGAAAATCCATACAAGTACCCGGTTTTTCAAGCAGGCCACAGGATTTGTTTGGGAAAAGAAATAGCTTTGGTCGAACTTAAATGCGTCGCATTTTCGCTTATACGACGATTCCGTATCGAACTAGAGACCAAATGTTATAGACCGCGGTTTTCTCCTGGTCTTACCGCCACTTTTAGCGGCGGTTTACTAGTGGCGGTACGAAAAAGAGAAACTCCCTGA | 1506 | 41.7 | MELEASWHLKYVYFRGLFVCFFLMLSFFYLLLRYLDKTKLYCNCETCQTYLKSSWSENFDNLCDWYAFLLKKSPTKTIHIHVLGNVITADQNNVEYILKTRFENYPKGKPFSKILGDFLGRGIFNVDGDLWRFQKHVASQELTKYSLRTYAFEIFTEEIEHHLVSFLAEKENIGVVLDLQDVFRRFSFDCMCKFLFGVDPISLLDFSVQISEFSVAFDLASKLSAERAMSVSPMVWKVKRMLGLGSEKQLKDAISLIDIFAREIIRNKRKIGFSNHKDLLSRFMGTINDERYLRDIIISFLLAGRDTVASALTSFFWLLSNHPRVEEAILREADRVIGNDKDVLINFEQLRELHYLQASMYESMRLYPPIQFDSKFCEEDDVLPDGTFVKRGTRVTYHQYAMSRIEEIWGPDCLEFKPERWLRDGIFFSENPYKYPVFQAGHRICLGKEIALVELKCVAFSLIRRFRIELETKCYRPRFSPGLTATFSGGLLVAVRKRETP | 501 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 13 | 9264743 | 9266264 | + | Conep13aG0122800.1 | Cone13ag1195 | 451582 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone13ag1195 | 501 | Gene3D | Cytochrome P450 | 52 | 500 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag1195 | 501 | Pfam | Cytochrome P450 | 84 | 474 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag1195 | 501 | SUPERFAMILY | Cytochrome P450 | 60 | 498 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag1195 | 501 | CDD | CYP86A | 80 | 491 | - | - | |
| Cone13ag1195 | 501 | PANTHER | CYTOCHROME P450 | 43 | 490 | - | - | |
| Cone13ag1195 | 501 | PRINTS | E-class P450 group I signature | 292 | 309 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag1195 | 501 | PRINTS | E-class P450 group I signature | 445 | 468 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag1195 | 501 | PRINTS | E-class P450 group I signature | 312 | 338 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag1195 | 501 | PRINTS | E-class P450 group I signature | 435 | 445 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag1195 | 501 | PRINTS | P450 superfamily signature | 445 | 456 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag1195 | 501 | PRINTS | P450 superfamily signature | 358 | 369 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag1195 | 501 | PRINTS | P450 superfamily signature | 303 | 320 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag1195 | 501 | PRINTS | P450 superfamily signature | 436 | 445 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone13ag1195 | Cone-Chr13:9264743 | Cone16ag0020 | Cone-Chr16:148165 | 3.88E-136 | dispersed | |
| Cone11ag1370 | Cone-Chr11:9950948 | Cone13ag1195 | Cone-Chr13:9264743 | 1.12E-215 | wgd | |
| Cone13ag1195 | Cone-Chr13:9264743 | Cone18ag0213 | Cone-Chr18:1052733 | 2.06E-218 | wgd | |
| Cone13ag1195 | Cone-Chr13:9264743 | Cone19ag1179 | Cone-Chr19:8279317 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone13ag1195 | K20624 | - | rcu:8273735 | 697.582 |