Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag1195 ATGGAGCTGGAAGCTTCATGGCACCTCAAGTATGTTTACTTTCGTGGTTTATTTGTTTGCTTCTTCCTCATGCTCTCTTTCTTTTACCTCTTGCTTAGGTACTTGGACAAAACAAAGCTTTATTGTAACTGTGAGACTTGTCAAACTTATCTCAAATCAAGTTGGTCGGAGAATTTCGATAATCTTTGTGATTGGTACGCCTTTCTTCTTAAAAAATCACCCACTAAAACCATTCACATACATGTTCTTGGCAACGTTATTACAGCAGACCAAAACAACGTTGAATACATCCTCAAGACAAGATTTGAGAATTACCCAAAAGGCAAGCCCTTCTCCAAGATCCTTGGAGATTTTCTGGGTCGAGGTATCTTCAACGTCGATGGAGATTTATGGAGGTTTCAGAAACACGTGGCTAGTCAAGAGCTTACGAAATACTCCTTGAGGACTTATGCTTTCGAGATTTTCACCGAAGAAATTGAACATCATCTTGTCTCTTTTTTGGCGGAGAAAGAGAATATTGGAGTAGTTTTGGATTTACAAGATGTGTTTAGACGTTTCTCTTTTGATTGTATGTGCAAGTTTCTATTCGGGGTGGACCCGATATCTTTATTAGACTTTTCAGTCCAAATATCGGAGTTCTCGGTAGCGTTCGATTTAGCATCGAAGCTGTCGGCCGAGAGAGCTATGTCGGTTTCACCGATGGTTTGGAAGGTCAAAAGGATGTTAGGTTTAGGGAGTGAAAAGCAATTGAAAGATGCAATCAGCTTGATTGATATCTTCGCTAGAGAAATCATAAGGAACAAACGAAAAATAGGGTTTTCAAACCATAAGGATCTGCTCTCAAGGTTCATGGGTACAATCAATGATGAAAGGTATTTGAGGGATATTATCATAAGCTTCCTATTGGCAGGCCGGGACACGGTGGCTTCCGCCTTGACAAGCTTCTTTTGGCTACTTTCAAACCATCCTCGTGTCGAGGAGGCAATTCTACGCGAGGCCGATCGGGTCATCGGAAATGACAAAGATGTCCTTATAAATTTTGAACAACTACGTGAACTTCACTACTTACAAGCATCGATGTATGAGAGTATGAGACTCTACCCACCGATTCAATTCGATTCAAAGTTTTGCGAGGAAGACGATGTTTTGCCTGACGGAACGTTCGTAAAGAGAGGAACTAGGGTTACTTACCACCAATATGCAATGAGTCGGATCGAAGAGATTTGGGGTCCAGACTGTTTGGAATTCAAGCCTGAACGATGGTTAAGAGATGGAATCTTCTTTTCAGAAAATCCATACAAGTACCCGGTTTTTCAAGCAGGCCACAGGATTTGTTTGGGAAAAGAAATAGCTTTGGTCGAACTTAAATGCGTCGCATTTTCGCTTATACGACGATTCCGTATCGAACTAGAGACCAAATGTTATAGACCGCGGTTTTCTCCTGGTCTTACCGCCACTTTTAGCGGCGGTTTACTAGTGGCGGTACGAAAAAGAGAAACTCCCTGA 1506 41.7 MELEASWHLKYVYFRGLFVCFFLMLSFFYLLLRYLDKTKLYCNCETCQTYLKSSWSENFDNLCDWYAFLLKKSPTKTIHIHVLGNVITADQNNVEYILKTRFENYPKGKPFSKILGDFLGRGIFNVDGDLWRFQKHVASQELTKYSLRTYAFEIFTEEIEHHLVSFLAEKENIGVVLDLQDVFRRFSFDCMCKFLFGVDPISLLDFSVQISEFSVAFDLASKLSAERAMSVSPMVWKVKRMLGLGSEKQLKDAISLIDIFAREIIRNKRKIGFSNHKDLLSRFMGTINDERYLRDIIISFLLAGRDTVASALTSFFWLLSNHPRVEEAILREADRVIGNDKDVLINFEQLRELHYLQASMYESMRLYPPIQFDSKFCEEDDVLPDGTFVKRGTRVTYHQYAMSRIEEIWGPDCLEFKPERWLRDGIFFSENPYKYPVFQAGHRICLGKEIALVELKCVAFSLIRRFRIELETKCYRPRFSPGLTATFSGGLLVAVRKRETP 501
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
13 9264743 9266264 + Conep13aG0122800.1 Cone13ag1195 451582
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag1195 501 Gene3D Cytochrome P450 52 500 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone13ag1195 501 Pfam Cytochrome P450 84 474 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone13ag1195 501 SUPERFAMILY Cytochrome P450 60 498 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone13ag1195 501 CDD CYP86A 80 491 - -
Cone13ag1195 501 PANTHER CYTOCHROME P450 43 490 - -
Cone13ag1195 501 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone13ag1195 501 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone13ag1195 501 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone13ag1195 501 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone13ag1195 501 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone13ag1195 501 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone13ag1195 501 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone13ag1195 501 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag1195 Cone-Chr13:9264743 Cone16ag0020 Cone-Chr16:148165 3.88E-136 dispersed
Cone11ag1370 Cone-Chr11:9950948 Cone13ag1195 Cone-Chr13:9264743 1.12E-215 wgd
Cone13ag1195 Cone-Chr13:9264743 Cone18ag0213 Cone-Chr18:1052733 2.06E-218 wgd
Cone13ag1195 Cone-Chr13:9264743 Cone19ag1179 Cone-Chr19:8279317 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag1195 K20624 - rcu:8273735 697.582