Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag1224 ATGGAGGACACGAAGAAGTACCAGGAGGATCCGAGCGAGAGCAGTGACTACACGTCGGAAGACGAAGGAACGGAAGACTACCGTCGAGGAGGGTACCACGCTGTTCGAATCGGCGACACTTTTAAGAACAGTCGCTATGTCGTGCAGAGCAAGCTTGGTTGGGGCCATTTCTCCACCGTCTGGCTCGCCTGGGATACTCAGACCTCAAAATATGTGGCCTTGAAAGTGCAAAAGAGTGCACAGCACTACACTGAGGCAGCCATGGATGAGATCGCCATCTTGCAACAAATTGCAGAGGGGGATCCCGAAGATAAAAAATGTGTGGTGAAGCTTTTGGATCATTTCAAGCATTCAGGTCCAAATGGGCAGCATGTTTGTATGGTTTTTGAATACCTAGGGGATAATCTCTTGACACTTATAAAGTATACTGATTATCATGGGTTGCCGATTCATCGAGTTAAAGAGATATGTTATCATGTATTAGTTGGATTGGACTATTTACACAAGCAGTTATCTATTATACACACTGATCTGAAGCCAGAAAATATTTTGCTACTCTCTATGATAGACCCGTCAAAGGATCCCAGAAAGTCAGGTTCTCCTCTCATCCTTCCTAATAATAAGAATAAGGTTGGTTTAGAATCAGGGGTTGCAAGAGAAATTAAGAAATTAAACGGTGATTTGACAAGTAACCAGAAGAAGATTAGAAGGAAAGCTAAGCGGGCTGCTAAGGATTTTTCCGGGAAGGATGTTGCTGCCATGGAGTCTGAGGCAGAGCCAGAATCTTCTGATGCGGTAGAATATTCTCCAAACTCAAAGTCAAACTGTGAGGTCCAGTCAAGTAGTTCAATCAATGTGATTGATGGTAAAAAGAGTAATAAAAAAGGGAATCGATCCACAAGGAAGAAGCTGTTGATGTCGGTTGACCTGAAATGTAAACTGGTTGACTTTGGGAATGCATGTTGGACATATAAACAGTTTACGAATGATATTCAGACCAGACAGTATCGGTGTCCAGAAGTGATCCTTGGATCTAAGTATTCTACTTCAGCAGATCTCTGGTCTTTTGCCTGCATTTGCTTTGAGCTTGTTACTGGCGATGTGCTCTTCGATCCTCATAGTGGTGATAACTTTGATAGGGATGAGGATCACTTGGCATTAATGATGGAGCTTCTTGGGATGATGCCGCGAAAGATTGCTTTAGGTGGTTGTTATTCTCGGGATTTCTTTAACAGACACGGTGATTTGAGGCATATCCGTAGATTACGATTCTGGCCCTTGCACAAAGTTCTTATAGAGAAGTATGAATTAAGCGAGCAAGACGCAAATGACATGGCTGAATTTCTTATACCTATTCTTGATTTTGTCCCTGAGAAGCGGCCCTCTGCCGGTCAATGCCTTCTTCATCCATGGATAGATCTCCGCCCGCGATTGTTAGAACCTTCCATTTCTTGTAAGGAAAACCAGGTTCTTGAGAATGAGAGAAAGAAGAGGGAGAAGGAACCTTCTGTTTCTTGCAAGGAAAACCAGGTTCTTCAGAATGAGAGAAAGAAAAGGGAGAAGGATGAAAGAGAGGCGGTGGAGGTCGGAATGGGAAATATTGCTATCAATTCGGATTCTTCAAAAACATCTAATCCAACCACAAGCAGCTTATCTCGGTAG 1662 43.26 MEDTKKYQEDPSESSDYTSEDEGTEDYRRGGYHAVRIGDTFKNSRYVVQSKLGWGHFSTVWLAWDTQTSKYVALKVQKSAQHYTEAAMDEIAILQQIAEGDPEDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGDNLLTLIKYTDYHGLPIHRVKEICYHVLVGLDYLHKQLSIIHTDLKPENILLLSMIDPSKDPRKSGSPLILPNNKNKVGLESGVAREIKKLNGDLTSNQKKIRRKAKRAAKDFSGKDVAAMESEAEPESSDAVEYSPNSKSNCEVQSSSSINVIDGKKSNKKGNRSTRKKLLMSVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGSKYSTSADLWSFACICFELVTGDVLFDPHSGDNFDRDEDHLALMMELLGMMPRKIALGGCYSRDFFNRHGDLRHIRRLRFWPLHKVLIEKYELSEQDANDMAEFLIPILDFVPEKRPSAGQCLLHPWIDLRPRLLEPSISCKENQVLENERKKREKEPSVSCKENQVLQNERKKREKDEREAVEVGMGNIAINSDSSKTSNPTTSSLSR 553
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 9414241 9416759 + Conep13aG0125700.1 Cone13ag1224 451611
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0876 Cone-Chr12:7811587 Cone13ag1224 Cone-Chr13:9414241 2.62E-161 dispersed
Cone13ag1224 Cone-Chr13:9414241 Cone8ag0903 Cone-Chr8:8773755 9.74E-163 dispersed
Cone1ag0509 Cone-Chr1:4999402 Cone13ag1224 Cone-Chr13:9414241 1.17E-198 wgd
Cone13ag1224 Cone-Chr13:9414241 Cone19ag1210 Cone-Chr19:8435198 0 wgd
Cone13ag1224 Cone-Chr13:9414241 Cone5ag1374 Cone-Chr5:8378468 6.41E-258 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82047 PF03088 Str_synth 1.90E-30 CL0186 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag1224 K08832 - vvi:100254468 830.091