Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag1248 ATGCAAGAGGATAAGTTTAGCGGTGGCGGCGGCGGCCGCAACCCAAGATCAATCGTGGCTTTCGGCCTCCAAGTGCTGCTAGGCCGATGGTTCATGTTCTTCGCCTCCTTACTAATCATGTCAGTCGCAGGAGCGACCTACATGTTCAGTCTATACTCCGGCGAAGTAAAATCCTCCTTAGGCTATGACCAAACTACCCTCAACCTCCTCAGCTTCTTCAAAGACCTAGGCGGAAACGTTGGAGTCATATCCGGCCTCCTCAATGAAATCTTGCCACCATGGACCATCCTCTTAACCGGAGCCGTCATGAACCTCTCTGGCTACTTCATGATATGGCTTGCCATCACTCACCGTATCTCTAAACCGAAACTGTGGCAGATGTGCTTGTACATTTGCCTTGGAGCTAACTCTCAAACCTTTGCTAACACAGGTGCTTTAGTCACTTGTGTTAAGAACTTCCCTCAAACTAGAGGTAGTGTCTTGGGAATTCTGAAGGGTTTTGTCGGGTTAAGTGGTGCAATCTTGACTCAATTCTATCATGCCTTTTATGGAAACAACAGTAAAGCTCTTATTTTCCTTATTGGTTGGCTTCCGGCCGCCGTCTCGATCTTTCTTCTTCCTTTCATTCGAGTTATTAAGATCGTTAAAAACCCGAAAGAGCTTCGTGTTTTTTATAATCTTCTCTATATATCTCTTAGTCTCGCTGGGTTTCTCATGGTTTTAATTGTCTTACAAAATAGACTCAAGTTTACTAGATACGAGTATATACTTGGTGCTTGTGTTGTGATTGTCCTACTCCTTCTCCCTCTTGCTATTGTTTTCAAAGAAGAATCTGATCTTTGGAAGGCCAAGTTACAATCCAGCTTGAATAATGGTCTAAAAGCTATCGTAATCGCTGAATTATCCCCCCTACCACCGCTGCTGCCGCCGCTAGTTCGTACAACTTCTCGGAAAGTGGATGGTTGTTTTCAAAACGTGTTCCGGGCACCGGACAGAGGCGAGGACTACTCAATTTTACAAGCACTTTTCAGCATAGACATGTGGATACTATTTGTTGCTACAATATGCGGGGTTGGCGGGACCTTAACGGTCATCGACAATTTGGGCCAGATCGGAAGCTCATTGGGATACCCGACTGAATCCATCACCACCTTCGTTTCACTTGTGAGTATATGGAATTACCTAGGAAGGGTAGTTTCGGGATTCGCATCTGAATTCGTCTGGAAAAAGTACAAATTCCCTCGTCCATTGTTACTTACCTTTGTTCTGCTCTTTTCATGCGTTGGCCATCTTCTTATCGCATTCGGAGTGCCTAATTCTCTCTACTTCTCCTCCATTGTTATCGGCTTTTGTTTCGGGGCTCAGTGGCCATTGATCTTCGCAATCATATCTGAGATATTTGGGCTGAAGTACTACGCCACGTTGTACAATCTGGGCGGGGCCGCCAGCCCCGTTGGGTCGTATCTTCTGAACGTCAAGGTGGCGGGCTATTTGTACGATAAGGAGGCGTTGAAGCAGTTGAAGGCGTTGGGCCGTATTAGAGAGGATGGCCAGGATTTGACCTGCCACGGGATGGATTGTTACAAACTGGCGTTTATTATTATCACGGCGGCAACGCTGTTTGGGGCCGTTATTTCGTTCATTTTGGTGGTTAGGACGTGGAGCTTTTACAAGGGGGATATATACAAGAGGTTTAAGGAGGAAGTGGATGAGAGTGAGATGACGGGGAAAAATGGCGGCGTGTTGGTGCAGGAAACTGATTATGCGGTGGCGGGGAGTAATAAAAGCGCGCTGGAGAAATCTGGAGTGCCGTAA 1815 46.56 MQEDKFSGGGGGRNPRSIVAFGLQVLLGRWFMFFASLLIMSVAGATYMFSLYSGEVKSSLGYDQTTLNLLSFFKDLGGNVGVISGLLNEILPPWTILLTGAVMNLSGYFMIWLAITHRISKPKLWQMCLYICLGANSQTFANTGALVTCVKNFPQTRGSVLGILKGFVGLSGAILTQFYHAFYGNNSKALIFLIGWLPAAVSIFLLPFIRVIKIVKNPKELRVFYNLLYISLSLAGFLMVLIVLQNRLKFTRYEYILGACVVIVLLLLPLAIVFKEESDLWKAKLQSSLNNGLKAIVIAELSPLPPLLPPLVRTTSRKVDGCFQNVFRAPDRGEDYSILQALFSIDMWILFVATICGVGGTLTVIDNLGQIGSSLGYPTESITTFVSLVSIWNYLGRVVSGFASEFVWKKYKFPRPLLLTFVLLFSCVGHLLIAFGVPNSLYFSSIVIGFCFGAQWPLIFAIISEIFGLKYYATLYNLGGAASPVGSYLLNVKVAGYLYDKEALKQLKALGRIREDGQDLTCHGMDCYKLAFIIITAATLFGAVISFILVVRTWSFYKGDIYKRFKEEVDESEMTGKNGGVLVQETDYAVAGSNKSALEKSGVP 604
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 9498851 9500923 - Conep13aG0128100.1 Cone13ag1248 451635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag1248 604 SUPERFAMILY MFS general substrate transporter 29 554 IPR036259 -
Cone13ag1248 604 FunFam Nodulin family protein 338 559 - -
Cone13ag1248 604 CDD MFS_Mch1p_like 28 543 - -
Cone13ag1248 604 Gene3D MFS general substrate transporter like domains 217 503 IPR036259 -
Cone13ag1248 604 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 28 566 - GO:0016020(PANTHER)
Cone13ag1248 604 Pfam Nodulin-like 29 274 IPR010658 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag1324 Cone-Chr11:9752160 Cone13ag1248 Cone-Chr13:9498851 2.99E-170 dispersed
Cone13ag1248 Cone-Chr13:9498851 Cone5ag0368 Cone-Chr5:1564676 3.80E-243 dispersed
Cone2ag0869 Cone-Chr2:34642511 Cone13ag1248 Cone-Chr13:9498851 4.72E-108 transposed
Cone1ag1376 Cone-Chr1:56654358 Cone13ag1248 Cone-Chr13:9498851 6.42E-246 wgd
Cone11ag1323 Cone-Chr11:9748372 Cone13ag1248 Cone-Chr13:9498851 2.51E-228 wgd
Cone13ag1248 Cone-Chr13:9498851 Cone18ag0250 Cone-Chr18:1225841 1.93E-10 wgd
Cone13ag1248 Cone-Chr13:9498851 Cone18ag0537 Cone-Chr18:2651571 1.42E-73 wgd
Cone13ag1248 Cone-Chr13:9498851 Cone5ag0367 Cone-Chr5:1562366 3.62E-226 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag1248 - - - 0.0