Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag1277 ATGTCCGTTGTTTCCGTTGCCCTAGAGACAAGGTATGGGATCGAATCAGAACAAGGATCAGACAGAAACTTTGGTCTGAGAAATTTCAAGTACGTCAATACAATCAAAGCGGCGGTTGAAACGGAGTGCCATCTTACTGTTTCTTGTGCTGATATTGTTGCTCGTTCTGCCAAACATGGAATCCCACTGTTAGGAGGACCTGCAATCGACATGAAGACTGGAAGGAAGGACAGCAAGGAAAGTTACGTTGGAGTAGTCGACAGTTTCATTCCTAATCACTACGACAGCGTTCCGGTGGTTCTCTCTCACTTTCAATCCATAGGCATTGATGTTGAAGCCACCGTCGCCCTTCTAGGAGGGAATTCGGTAGGGCGGGTCCACTGCACAAATATGGTTGATCGGCTCTACCCTACCGTCGATCCGTCGCTCGATCTGGTCTATGCACAGTACTTAAAGGGAAGATGTCCCACACCAACTCCGGAACCCAAAGCAGTTCTATCTGCTCGAAACGACAGAGTAACACCCATGGTTTTGGATAACAATTACTACAAGAACGTTCTAAAGAAGTAG 570 47.02 MSVVSVALETRYGIESEQGSDRNFGLRNFKYVNTIKAAVETECHLTVSCADIVARSAKHGIPLLGGPAIDMKTGRKDSKESYVGVVDSFIPNHYDSVPVVLSHFQSIGIDVEATVALLGGNSVGRVHCTNMVDRLYPTVDPSLDLVYAQYLKGRCPTPTPEPKAVLSARNDRVTPMVLDNNYYKNVLKK 189
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 9610842 9611954 + Conep13aG0131000.1 Cone13ag1277 451664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag1277 189 Gene3D Peroxidase, domain 2 92 188 - -
Cone13ag1277 189 Gene3D - 5 91 - -
Cone13ag1277 189 PRINTS Plant peroxidase signature 46 56 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone13ag1277 189 PRINTS Plant peroxidase signature 112 124 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone13ag1277 189 PRINTS Plant peroxidase signature 27 40 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone13ag1277 189 PRINTS Plant peroxidase signature 169 184 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone13ag1277 189 PRINTS Plant peroxidase signature 65 80 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone13ag1277 189 PANTHER - 5 188 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone13ag1277 189 Pfam Peroxidase 6 188 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone13ag1277 189 SUPERFAMILY Heme-dependent peroxidases 5 188 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone13ag1277 189 PRINTS Haem peroxidase superfamily signature 47 64 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone13ag1277 189 PRINTS Haem peroxidase superfamily signature 171 186 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone13ag1277 189 PRINTS Haem peroxidase superfamily signature 113 128 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone13ag1277 189 PRINTS Haem peroxidase superfamily signature 65 77 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone13ag1277 189 ProSiteProfiles Plant heme peroxidase family profile. 5 189 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag1277 Cone-Chr13:9610842 Cone6ag1090 Cone-Chr6:6646757 1.51E-63 dispersed
Cone13ag1277 Cone-Chr13:9610842 Cone19ag1264 Cone-Chr19:8643198 1.18E-108 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag1277 K00430 - rcu:8284550 278.1