Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag1302 ATGGCTGCTACGACTTTTGAAGAGGTTCTTCCACCGTCGCTTGAAGCCACCGCCGAGCAGCCACCGCTCTTTGACGGAACCACCAGGTTGTATACTGCTTATATATGCCCTTATGCACACCGTGTATGGATCACCCGGAATTACAAGGGTCTACAGGATACAATCAAGTTAGTTCCTCTTGAACTTTCAAACAGGCCTGTCTGGTACAAAGAGAAAGTCTACCCTCCAAACAAGGTTCCATCTTTGGAGCACAATGGGAAAATTATTGGAGAAAGTCTTGATTTGATCAAATATGTTGATAGCAACTTTGGACAGCCTTCCCTTTACCCAGATGATGCTGATAAAAGACAGTTTGGAGAAGAGTTGATTTCCTACCTTGATACATTCACTCCTGCAGTGCATGGGTCATTGAAAGGACCAGATCCAGCGAAGCAAGCTGGTGCTCAGTTTGATTACTTGGAAAATGCTTTGCATAAATTTAATGACGGTCAATTCCTCCTTGGCCAATTTAGCTATGTAGAGATAGCATATATTCCCTTCATTGAAAGGTTCCAGATCTTCCTATCTGAAGTATGGAATTATGATATCACACAAGGAAGGCCTAAACTAGCTTCTTGGCTGGAGGAAATCAACAAGATTGATGCATATAAGCAAACAAAAATGGATCCCAAGCTGCTTGTTGAAACCTATAAGAAGGTTCTAGCACGTGCTTAG 714 42.58 MAATTFEEVLPPSLEATAEQPPLFDGTTRLYTAYICPYAHRVWITRNYKGLQDTIKLVPLELSNRPVWYKEKVYPPNKVPSLEHNGKIIGESLDLIKYVDSNFGQPSLYPDDADKRQFGEELISYLDTFTPAVHGSLKGPDPAKQAGAQFDYLENALHKFNDGQFLLGQFSYVEIAYIPFIERFQIFLSEVWNYDITQGRPKLASWLEEINKIDAYKQTKMDPKLLVETYKKVLARA 237
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 9718133 9719936 - Conep13aG0133500.1 Cone13ag1302 451689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag1302 237 Gene3D Glutaredoxin 1 104 - -
Cone13ag1302 237 Pfam Glutathione S-transferase, C-terminal domain 147 208 - -
Cone13ag1302 237 SFLD Glutathione Transferase (cytosolic) 29 210 IPR040079 -
Cone13ag1302 237 PANTHER GLUTATHIONE S-TRANSFERASE L1 1 234 IPR044629 GO:0004364(PANTHER)|GO:0004364(InterPro)|GO:0010731(PANTHER)
Cone13ag1302 237 SUPERFAMILY Thioredoxin-like 21 108 IPR036249 -
Cone13ag1302 237 FunFam Glutathione S-transferase L2, chloroplastic 1 104 - -
Cone13ag1302 237 Pfam Glutathione S-transferase, N-terminal domain 30 106 IPR004045 -
Cone13ag1302 237 Gene3D - 105 236 - -
Cone13ag1302 237 SUPERFAMILY GST C-terminal domain-like 103 234 IPR036282 -
Cone13ag1302 237 CDD GST_C_Lambda 112 231 - -
Cone13ag1302 237 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 26 107 IPR004045 -
Cone13ag1302 237 FunFam Lambda class glutathione S-transferase 104 237 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag1302 Cone-Chr13:9718133 Cone3ag0300 Cone-Chr3:1547738 1.99E-94 dispersed
Cone1ag1330 Cone-Chr1:56437501 Cone13ag1302 Cone-Chr13:9718133 4.92E-97 wgd
Cone10ag0272 Cone-Chr10:1296589 Cone13ag1302 Cone-Chr13:9718133 8.14E-129 wgd
Cone13ag1302 Cone-Chr13:9718133 Cone3ag0299 Cone-Chr3:1542745 5.22E-111 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag1302 K00799 - vvi:100261962 360.533