Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone13ag1304 | ATGGGTCAAGTTCAATTAGCCATGGAGAGAGATGAAGATGATGCAAATGGAAGTGTTGATGGCTTATTGTGGCACAAAGATTTGGGGCACCATATTTATGGACAATTCTCAATGGCTGTAATGCAGGCCAATTATTTCTTGGAAGATGAAAGCCAGTTTGAATCCGGGCCGCTGACTTTCAACGATCTTGAACCTTCCGGAACCTTCATTGGCGTCTATGATGGCCATGGCGGCCCACAAGCCTCCCGCTATATCGCTCAAAATCTCTTATCCAATCTCAAGAAATTTGCGACTATGCATAAAGGAATATCGGAAAATGTGATCAGAAATAGTTATGCAGCAACAGAAGAAGGATTTCTGTCTCTTGTGCAGAAAAAATGGCTTAATAAACCGGAAATTGCATCTGCCGGATCATGCTGTTTGATCGGGATTATATGCTACGGATTTCTGTATATAGCAAATGCAGGGGATTCAAGAGTAGTACTTGGTAAAACCGTGCGAGCAACCCAAGAAGTCATAGCAGTTCAATTATCTACAGAGCACAACGCAAGCATAGAGTCAGTTAGACAAGAGCTTCGATCAATTCATCCAGAAGATCCACACATTGTTGTACAAAAACATAATGCTTGGCGTGTCAAAGGAATCATACAGGTTTCGAGATCGATTGGTGATGCGTATTTGAAGAAGGCAGAGTTTAACAGAGAGCCACTGCTGCCCAAGTTTAGGCTGCCCGAGCCTTTTCATAAACCAATTATTAGTGCTGAGCCAACCATATCGGTACATAAACTCTGCCCGGAGGATCGGTTTTTGGTTTTTGCTTCGGATGGTCTGTGGGAGCACCTTAACAATGACAAGGTTGTAGATATTGTCAATAGTACCTCCAGAAATGTAAGCCGTTGA | 900 | 42.89 | MGQVQLAMERDEDDANGSVDGLLWHKDLGHHIYGQFSMAVMQANYFLEDESQFESGPLTFNDLEPSGTFIGVYDGHGGPQASRYIAQNLLSNLKKFATMHKGISENVIRNSYAATEEGFLSLVQKKWLNKPEIASAGSCCLIGIICYGFLYIANAGDSRVVLGKTVRATQEVIAVQLSTEHNASIESVRQELRSIHPEDPHIVVQKHNAWRVKGIIQVSRSIGDAYLKKAEFNREPLLPKFRLPEPFHKPIISAEPTISVHKLCPEDRFLVFASDGLWEHLNNDKVVDIVNSTSRNVSR | 299 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 9722631 | 9724594 | - | Conep13aG0133700.1 | Cone13ag1304 | 451691 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone13ag1304 | 299 | SUPERFAMILY | PP2C-like | 60 | 292 | IPR036457 | - | |
Cone13ag1304 | 299 | ProSitePatterns | PPM-type phosphatase domain signature. | 69 | 77 | IPR000222 | GO:0043169(InterPro) | |
Cone13ag1304 | 299 | Gene3D | - | 24 | 299 | IPR036457 | - | |
Cone13ag1304 | 299 | PANTHER | PROTEIN PHOSPHATASE | 29 | 295 | IPR015655 | GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Cone13ag1304 | 299 | SMART | PP2C_4 | 25 | 297 | IPR001932 | - | |
Cone13ag1304 | 299 | CDD | PP2Cc | 60 | 298 | IPR001932 | - | |
Cone13ag1304 | 299 | ProSiteProfiles | PPM-type phosphatase domain profile. | 35 | 299 | IPR001932 | - | |
Cone13ag1304 | 299 | Pfam | Protein phosphatase 2C | 60 | 294 | IPR001932 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone13ag1304 | Cone-Chr13:9722631 | Cone8ag0870 | Cone-Chr8:8576582 | 1.46E-130 | dispersed | |
Cone13ag1304 | Cone-Chr13:9722631 | Cone19ag1291 | Cone-Chr19:8745634 | 1.62E-172 | wgd | |
Cone13ag1304 | Cone-Chr13:9722631 | Cone3ag0302 | Cone-Chr3:1556709 | 7.31E-130 | wgd | |
Cone13ag1304 | Cone-Chr13:9722631 | Cone5ag0316 | Cone-Chr5:1328554 | 6.26E-139 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone13ag1304 | K01102 | - | csv:101210750 | 450.284 |