Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag1304 ATGGGTCAAGTTCAATTAGCCATGGAGAGAGATGAAGATGATGCAAATGGAAGTGTTGATGGCTTATTGTGGCACAAAGATTTGGGGCACCATATTTATGGACAATTCTCAATGGCTGTAATGCAGGCCAATTATTTCTTGGAAGATGAAAGCCAGTTTGAATCCGGGCCGCTGACTTTCAACGATCTTGAACCTTCCGGAACCTTCATTGGCGTCTATGATGGCCATGGCGGCCCACAAGCCTCCCGCTATATCGCTCAAAATCTCTTATCCAATCTCAAGAAATTTGCGACTATGCATAAAGGAATATCGGAAAATGTGATCAGAAATAGTTATGCAGCAACAGAAGAAGGATTTCTGTCTCTTGTGCAGAAAAAATGGCTTAATAAACCGGAAATTGCATCTGCCGGATCATGCTGTTTGATCGGGATTATATGCTACGGATTTCTGTATATAGCAAATGCAGGGGATTCAAGAGTAGTACTTGGTAAAACCGTGCGAGCAACCCAAGAAGTCATAGCAGTTCAATTATCTACAGAGCACAACGCAAGCATAGAGTCAGTTAGACAAGAGCTTCGATCAATTCATCCAGAAGATCCACACATTGTTGTACAAAAACATAATGCTTGGCGTGTCAAAGGAATCATACAGGTTTCGAGATCGATTGGTGATGCGTATTTGAAGAAGGCAGAGTTTAACAGAGAGCCACTGCTGCCCAAGTTTAGGCTGCCCGAGCCTTTTCATAAACCAATTATTAGTGCTGAGCCAACCATATCGGTACATAAACTCTGCCCGGAGGATCGGTTTTTGGTTTTTGCTTCGGATGGTCTGTGGGAGCACCTTAACAATGACAAGGTTGTAGATATTGTCAATAGTACCTCCAGAAATGTAAGCCGTTGA 900 42.89 MGQVQLAMERDEDDANGSVDGLLWHKDLGHHIYGQFSMAVMQANYFLEDESQFESGPLTFNDLEPSGTFIGVYDGHGGPQASRYIAQNLLSNLKKFATMHKGISENVIRNSYAATEEGFLSLVQKKWLNKPEIASAGSCCLIGIICYGFLYIANAGDSRVVLGKTVRATQEVIAVQLSTEHNASIESVRQELRSIHPEDPHIVVQKHNAWRVKGIIQVSRSIGDAYLKKAEFNREPLLPKFRLPEPFHKPIISAEPTISVHKLCPEDRFLVFASDGLWEHLNNDKVVDIVNSTSRNVSR 299
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 9722631 9724594 - Conep13aG0133700.1 Cone13ag1304 451691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag1304 299 SUPERFAMILY PP2C-like 60 292 IPR036457 -
Cone13ag1304 299 ProSitePatterns PPM-type phosphatase domain signature. 69 77 IPR000222 GO:0043169(InterPro)
Cone13ag1304 299 Gene3D - 24 299 IPR036457 -
Cone13ag1304 299 PANTHER PROTEIN PHOSPHATASE 29 295 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cone13ag1304 299 SMART PP2C_4 25 297 IPR001932 -
Cone13ag1304 299 CDD PP2Cc 60 298 IPR001932 -
Cone13ag1304 299 ProSiteProfiles PPM-type phosphatase domain profile. 35 299 IPR001932 -
Cone13ag1304 299 Pfam Protein phosphatase 2C 60 294 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag1304 Cone-Chr13:9722631 Cone8ag0870 Cone-Chr8:8576582 1.46E-130 dispersed
Cone13ag1304 Cone-Chr13:9722631 Cone19ag1291 Cone-Chr19:8745634 1.62E-172 wgd
Cone13ag1304 Cone-Chr13:9722631 Cone3ag0302 Cone-Chr3:1556709 7.31E-130 wgd
Cone13ag1304 Cone-Chr13:9722631 Cone5ag0316 Cone-Chr5:1328554 6.26E-139 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag1304 K01102 - csv:101210750 450.284