Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag1320 ATGAATATATATAAATGGTGTAGCGCTGCGAAGCCGTTCTTCGCCGTTATATTCTTGCAGTTTGGGTTAGCAGGAATGGATATTCTTTCAAATGCAGCACTGAATCAAGGGATGAGCAACTACGTGCTTGTTGTATGTAGACATGCTGTCGCTCCTTTCGCACTTGTTTTCGACAAGAAAGTACGACCGAAAATGACACTTCCGATTTTCATCAAGATCACGGCCCTCGCCTTGCTAGAGCCGGTTATCGATCAAAATCTGTATTTCCTAGGGATGAAATACACTACGGCGACGTTTGCAGCCGCTATGTGTAATATTCTTCCCGCCATTACTTTCGTAATGGCTTGGGTTCTTAGGCTTGAGAATGTGAAGCTTAGAAGCATTAGAAGCCAAGCAAAGATTATAGGAACTTTAGCTACTGTTGGTGGAGCTATGGTGATGACTCTACTAAAGGGTCCAATTATCGAACTCGTTTGGACCAAAGGAACGACCTATCACAAACAACAACAACAACAAAGAACCGAAATGAGCCTCCAAAATTCAATTAAAGGCGCGCTAATGATTACTATCGGATACTTCAGTTGGGCTTGTTTCATGAATCTTCAAGCAATTACCCTGAAATCATATCCGGTCGAGTTGTCTTTAACAGCTTGGATATGTCTGATGGGCACGGTGGAGGGGACTGCCGTGGCGCTCGTGATGGAAAGAGGAAATAGTGCAGTTTGGAGTATAACCTGGGGAACAAAACTACTGGCAGCTGTTTATAGCGGCATATTTTGTTCTGCACTAGCTTACTATATTCAAGGACTAGTAATGAAAGACAAAGGTCCGGTTTTCGTTACTGCGTTTAATCCTCTAAGTACGGTTATTGTTGCTGTAATGAGCTCGTTTATACTTGCTGAAAGACTTTATCTTGGAAGGGTACTTGGTGCGGTGGTGATTATAGCGGGACTATATCTTGTTGTTTGGGGTAAAAGTAAGGATGAAACGACACAAACTGTGTGTAAGGAAAAGATAGCATTTCCCAAAAAAAAAAAACGGGGAGTAACGGTAAGGAAAATTTCAAGCATGAGGTCATCGCTATTGACGCGTCTATTGAACGGAAATTGGTAA 1113 42.32 MNIYKWCSAAKPFFAVIFLQFGLAGMDILSNAALNQGMSNYVLVVCRHAVAPFALVFDKKVRPKMTLPIFIKITALALLEPVIDQNLYFLGMKYTTATFAAAMCNILPAITFVMAWVLRLENVKLRSIRSQAKIIGTLATVGGAMVMTLLKGPIIELVWTKGTTYHKQQQQQRTEMSLQNSIKGALMITIGYFSWACFMNLQAITLKSYPVELSLTAWICLMGTVEGTAVALVMERGNSAVWSITWGTKLLAAVYSGIFCSALAYYIQGLVMKDKGPVFVTAFNPLSTVIVAVMSSFILAERLYLGRVLGAVVIIAGLYLVVWGKSKDETTQTVCKEKIAFPKKKKRGVTVRKISSMRSSLLTRLLNGNW 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 9780093 9781745 - Conep13aG0135300.1 Cone13ag1320 451707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag1320 370 PANTHER WAT1-RELATED PROTEIN 15 335 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cone13ag1320 370 SUPERFAMILY Multidrug resistance efflux transporter EmrE 231 326 - -
Cone13ag1320 370 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 150 - -
Cone13ag1320 370 Pfam EamA-like transporter family 183 322 IPR000620 GO:0016020(InterPro)
Cone13ag1320 370 Pfam EamA-like transporter family 36 146 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag1320 Cone-Chr13:9780093 Cone4ag1395 Cone-Chr4:11243721 2.09E-119 dispersed
Cone10ag0293 Cone-Chr10:1389563 Cone13ag1320 Cone-Chr13:9780093 1.87E-171 wgd
Cone11ag1117 Cone-Chr11:8677300 Cone13ag1320 Cone-Chr13:9780093 6.93E-130 wgd
Cone13ag1320 Cone-Chr13:9780093 Cone18ag0463 Cone-Chr18:2241742 3.56E-132 wgd
Cone13ag1320 Cone-Chr13:9780093 Cone19ag1306 Cone-Chr19:8813105 1.08E-214 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag1320 - - - 0.0