Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone13ag1373 | ATGCCAGCCCACGTCGATTTGGAGCAAGGGGTTCATCAGCATTCCGGAATCGGAAGCGACAACAGCTCCATCGACGACGGCGAAGGTTCGTGCTACTCTCAGTTTTTCTCAGCTAACGGGGGGTCCTACGATGAGTACAGGTTTGCTTCGGATTCGAGGAGACTTTCTTTGGGTTCATCAGATGATGGTTCGTTAGAGACGGTGGTGGAGATTGAAAATGGGGTTTCAGAAGTAAAGGTGCTTTTAGGTAAAGTGGAAGTGGAGAGGGACTGCAGAATTTGTCATCTGGGTTTGGAAAGTAATAGCCATGAATCTGGAGTTGCAATTGAATTAGGTTGTTCATGCAAAGAGGATCTAGCTGCTGCTCACAGGCATTGTGCTGAGGCCTGGTTTAAGATTAAGGGCAATAAGACATGCGAGATATGTCATTCCGTAGCGAGGAATGTTCTTGGAGCACATGAACTTGAACTAATCGAACAATCTGTCGAGTCCAACAACACCTCAACAACAGCCACCGTGCCGGGCGCACCATCAGAGCCTCGGAGCTTCTGGCGAGGTCAACGCTTCTTGAATTTCCTGCTTGCTTGCATGGTATTTGCTTTCGTCATATCATGGCTCTTTCACTTCAACGTGCCGTCATAA | 642 | 48.13 | MPAHVDLEQGVHQHSGIGSDNSSIDDGEGSCYSQFFSANGGSYDEYRFASDSRRLSLGSSDDGSLETVVEIENGVSEVKVLLGKVEVERDCRICHLGLESNSHESGVAIELGCSCKEDLAAAHRHCAEAWFKIKGNKTCEICHSVARNVLGAHELELIEQSVESNNTSTTATVPGAPSEPRSFWRGQRFLNFLLACMVFAFVISWLFHFNVPS | 213 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 10010431 | 10012315 | - | Conep13aG0140800.1 | Cone13ag1373 | 451760 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone13ag1373 | 213 | PANTHER | ZINC FINGER, RING-CH-TYPE | 17 | 212 | - | - | |
Cone13ag1373 | 213 | Pfam | RING-variant domain | 91 | 142 | IPR011016 | GO:0008270(InterPro) | |
Cone13ag1373 | 213 | SMART | ringv_2 | 90 | 143 | IPR011016 | GO:0008270(InterPro) | |
Cone13ag1373 | 213 | CDD | RING_CH-C4HC3_MARCH | 91 | 143 | - | - | |
Cone13ag1373 | 213 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 83 | 150 | IPR013083 | - | |
Cone13ag1373 | 213 | SUPERFAMILY | RING/U-box | 88 | 146 | - | - | |
Cone13ag1373 | 213 | ProSiteProfiles | Zinc finger RING-CH-type profile. | 83 | 149 | IPR011016 | GO:0008270(InterPro) | |
Cone13ag1373 | 213 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone13ag1373 | Cone-Chr13:10010431 | Cone1ag0217 | Cone-Chr1:1322891 | 5.91E-31 | dispersed | |
Cone1ag1243 | Cone-Chr1:56066039 | Cone13ag1373 | Cone-Chr13:10010431 | 1.04E-67 | wgd | |
Cone10ag0353 | Cone-Chr10:1675430 | Cone13ag1373 | Cone-Chr13:10010431 | 1.56E-37 | wgd | |
Cone13ag1373 | Cone-Chr13:10010431 | Cone19ag1368 | Cone-Chr19:9052368 | 3.86E-132 | wgd | |
Cone13ag1373 | Cone-Chr13:10010431 | Cone3ag0384 | Cone-Chr3:1932798 | 9.77E-70 | wgd | |
Cone13ag1373 | Cone-Chr13:10010431 | Cone5ag0225 | Cone-Chr5:957190 | 7.29E-68 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone13ag1373 | - | - | - | 0.0 |