Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag1383 ATGATTGTTTCCATGGACTTGAATGCCTCACCAATACCTGAAGAGGATGAAGAGACTTTTGAAAGGCATATAGAAGCCTACAGTGCTAGAGACGAACGAATAGAAACAGGAGCTGATATAGCGCGGCGGGAGCGAGATGAGAGACGTAAAAGAATGCGAAGGGAACGCCCTGATGAGAGACCGCTATATGTCTCTCATACTGTATCTCAACCACCCGCGTACGATTATTTCTATCCAACAAAGAAGCCCAATGATAGAAACAAGCTCCCTCCAGGTTGGTTGGATTGTCCTGCATTTGGTCAGGAAATATGTTGCATGATTCCTTCTAAGGTTCCTCTTGATGAGACATTCAATGAACATATTATCCCGGGTAAAAGATACTCATTTAAGCAAGTGATCCATCAACAAAGAGTTTTAGGGAGAAAGCTTGGTTTGGTGATAGACTTGACAAATACCACTCGTTACTATACCCATTCAGAATTCAGGAAAGAGGGTATCAAGCATGTTAAGATTCAATGCAAAGGGAGGGACTCTGTTCCTGACAATCCTTCTGTAAATAAGTTTGTCTATGAGGTCACTCAGTTTCTCTCACGTCAAAAACACTCAAAGAAGTATATCCTTGTCCATTGCACGCACGGGCATAATCGCACAGGATATATGATTGTTCATTATCTTATGCGATCCCAGTCAATATCTGTGACCCAGGCCATAAGAATATTTTCCGATGCACGTCCTCCTGGAATCTACAAGCCTGACTACATTGATGCACTTTATGCCTTTTATCACGAAAGAAAACCTGAAGCAGTTGTTTGCCCGCCAACTCCAGAGTGGAAGAGATCTTCTGATCTTGATCTTAATGGTGAAGCAGTGCCGGATGATGACGATGATGGATTTTCTGCTGCTCCTGTTCATCCTTCCCAGGAGAATCACGAAGTAGATGTGGTTATGACAAATGATGATGTTTTGGGAGATGATATTCCTGATGATCAGCGAGATGCTTTCCGACACTTTTGTTATCAAATGCTTAAGTTGGGGAGTGGGGTAAGAGGAAACTCTCAATTCCCTGGATCACACCCGGTTTCTCTCAACAGGGACAACTTACAACTGTTAAGGCAGCGGTATTATTATGCGACATGGAAAGCTGATGGAACTCGTTATATGATGCTTATAACCATGGATGGATGTTACTTGGTTGATAGAACTTTCACCTTCCGAAGGGTGCAAATGAGGTTCCCCTGCAGAAATACAAATGATGGTCTAGGTGAGAAGACTCACCACTACACATTGCTTGATGGGGAGATGATAATAGATACTCTACCCGACTCGAACAAGCAAGAAAGAAGATATCTTATATATGACATGATGGCAATCAACTCTGTCTCTATCATTGAGCGACCTTTCTGTGAACGGTGGAAAATGCTCGAGAAAGAAGTGATTGAACCCAGAAACATTGAGCGCCACAGTATTTACCAGAGTAGGAATCCTCATTATAGATATGATCTGGAGCCATTCAGGGTGAGGAGGAAAGATTTTTGGTTGCTCTCTGCAGTTACCAAGGTTTTAAAGGAATTCATTCCCCGGCTTTCACATGATGCAGATGGTCTAATATTCCAGGGATGGGATGATCCTTATGTTCCTCGCACGCATGAAGGTCTTCTGAAGTGGAAATATCCTGAAATGAACTCAGTTGACTTTTTATTCGAGGTAACCGATGATGATCGTCGGCTACTATTTCTTAATGAGCGAGGAAAGAAAAAATTAATGGACGGAAATAGAGTTGTATTCAAAGATGGTTCGGATCCCTCTTTCTTTTCGGGGAAGATTATCGAGTGCTCTTGGGTTGCTGAAGAACAAGAATGGGTTTGCATGCGAGGGAGGCCAGATAAATCTACACCCAATGAATTTAATACTTATAAAAAGGTGATGCGAAGCATAAGAGACAATATCACACAAGACATCTTGTTAGGCGAGATTCAGGAGATTATTTGCTTGCCCATGTATGCTGATCGGATAAGGAACGATAGCAAGGCACACCAGCATACAAATTCAGCGCGGCAAAAGAATAATAAAAACGAATCTCATAGGATTGAGGATTCAATTCGTCTCGTGAAGGACGATTTTTGTGAAGTGGTTCCTCCAATTTACTGTGATCATATGAAATCCTCTGTGATTAGGGTTTATGTCACATTCTTACTTCTCTTTGCTTCGTTGAATTGCTTTCATGGCGACGTTGCCGAGAAGAAGAAGAACAAGTTTCGGGAGCGAGAAGCTACCGACGATTCCCTAGGCTACCCTAACATCGATGAGGATGCTTTATTGAATACTCAGTGCCCTAGGAATTTAGAGCTCAGGTGGCAGACGGAAGTCAGTTCTAGCATATATGCTACACCCTTGATCGCTGATATCAACAGTGATGGAAAACTTGATATAGTGGTTCCCTCTTTTGTTCACTATCTCGAGGTTTTAGAAGGTAGTGATGGAGACAAAATGCCAGGTTGGCCTGCTTTTCACCAGTCAACTGTGCATGCCAGTCCTTTGCTGTATGACATTGACAAGGATGGTGTTAGAGAAATAGCTCTGGCAACATACAATGGCGAAGTACTCTTTTTCAGGGTATCTGGCTACTTGATGGCAGATAAGCTAGAAGTACCTCGTCGGAGAGTTCTTAAAAATTGGCATGTGAATTTAAAGCCAGATCCGATGGACCGGTCCCATCCTGATGTTCATGACGACCTATTGATCAAGGAAGCTGCAAATACAAATTCCATGCCTCAAACAAATGGAGTCACACCTGTGTTAAACCATTCAGCTTCTATCGGAACAACTGGAAACACAACTGAGGCCAACCATTCAGCTACAATTGGAATGAAAGGAAGTGTCCTTGAGTTGAACTCTTCAGCAACAGCATTTTATGGTTCCAATCAAGAGAGTGGAGTTAAAATAAATGGGAGTATGATAGAATCAAACATTAGGTTATCTACAAGGACTGGTAATGCTTCTGTAAACACAGAGCCAACAGAAACATCCAATGCAAGGAATGGAACTAGCGCTGGAAGACGGCTTCTGGATGATAGCACTTCCAAAGGTTCACAAGGTGATTCTGGGTCCAATAACAGTAAAAGTGAGGATGTCCCCGTTTCCACAGTGGAAAACGATGAAGCTTTAGAGGATATTGCTGATTCATCTTTTGATTTATTTCGTGAAAGCGATGAACTGGGTGATGAGTATAATTATGACTATGATGACTATGTTGATGACACAATGTGGGGAGATGAGGAATTCACTGAAGTGAAACACGAGAAGGAGGAGGACTATGTTAATGTTGACGCGCACATCTTGTGTACCCCTGTTATAGCTGACATTGACAATGACGGAGTATCAGAAATGGTTGTTGCTGTTTCTTATTTCTATGATCATGAGTATTATGACAACCCGGAGCATATGAAGGAATTGGGTGGTATTGATATTACAAAGTATGTTGCTGGTGCTATAGTTGTTTTTAACCTTGATTCCAAGCAAGTTAAGTGGACAACTCAACTAGATCTGAGTACAGATACTGGAAACTTCCGTGCCCATATATATTCTTCCCCTACAGTGGTTGATCTAGATGGTGATGGAAAATTGGACATTCTTGTTGGAACTTCCTATGGCATGTTCTATGTCTTGGATCATCTAGGCAAGACAAGAGAGAAGTTTCCTCTTGAAATGGCTGAAATCCAAGGAGGTGTAGTTGCCGCTGACATCAATGACGATGGAAAAATTGAACTTTTGACTGCTGATACACATGGAAATGTTGCTGCATGGACTACCCGAGGTGAAGAAATCTGGGAAAAGCATCTCAAGAGTCTTGTTCCTCAGGGTCCTACCGTTGGTGATATTGACGGGGATGGCCATACTGAAGTTGTGATTCCCACCTTATCGGGAAATATTTATGTCCTTAGCGGAAAGGACGGGTCTTTTGTTCGTCCTTATCCCTACAGAACCCATGGCAAGGTGATGAACCAAGTTCTTCTCATTGATTTAAATAAATATGGTGAGAAGAAGAAGGGTCTCACTCTTGTCACTACCTCATTCGACGGTTATCTCTATCTCATAGATGGACCCTCATCATGCGCTGATGTCGTTGATATTGGGGAGACTTCATATAGCATGGTCCTGGCTGACAATGTTGATGGTGGAGATGATCTTGATCTCATCGTTACAACGATGAACGGCAACGTCTTTTGTTTCTCAACTCCCTCTCCTCATCATCCCCTCAAGTCATGGAGGTCGTCTAATCAAGGAAGAAATGTTGTAGCAAATCGGTTCAACCGTGAAGGTATCTATGTGACACATCCGTCAAGAGCCTTTCGCGATGAAGAAGGCAAGAACTTTTGGGTTGACCTAGAGATTGTAGATAGTCACAGATTCCCATCCGGGTTACAAGCACCATATAACGTCACGACGACCTTGTTAGTTCCTGGTAACTACCAAGGAGAGAGAAGAATAATCCAAAACCAGATCATTGATAAGCCAGGGAGACATCAGATAAAGCTCCCAACAGTTAATGTAAGGACGTCAGGGACAGTTTTGGTGGAGATGGTTGATAAGAATGGGCTCTATTTCTCGGATGACTTTTCCCTCACATTCCACATGCATTACTATAAACTGTTGAAGTGGCTTCTTGTCCTTCCTATGCTCGGAATGTTCGGTGTGCTAGTCATCCTTAGACCCCAAGAGCCCGTGCCTTTGCCCTCATTTTCACGCAACACTGATCTATGA 4761 42.62 MIVSMDLNASPIPEEDEETFERHIEAYSARDERIETGADIARRERDERRKRMRRERPDERPLYVSHTVSQPPAYDYFYPTKKPNDRNKLPPGWLDCPAFGQEICCMIPSKVPLDETFNEHIIPGKRYSFKQVIHQQRVLGRKLGLVIDLTNTTRYYTHSEFRKEGIKHVKIQCKGRDSVPDNPSVNKFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHYLMRSQSISVTQAIRIFSDARPPGIYKPDYIDALYAFYHERKPEAVVCPPTPEWKRSSDLDLNGEAVPDDDDDGFSAAPVHPSQENHEVDVVMTNDDVLGDDIPDDQRDAFRHFCYQMLKLGSGVRGNSQFPGSHPVSLNRDNLQLLRQRYYYATWKADGTRYMMLITMDGCYLVDRTFTFRRVQMRFPCRNTNDGLGEKTHHYTLLDGEMIIDTLPDSNKQERRYLIYDMMAINSVSIIERPFCERWKMLEKEVIEPRNIERHSIYQSRNPHYRYDLEPFRVRRKDFWLLSAVTKVLKEFIPRLSHDADGLIFQGWDDPYVPRTHEGLLKWKYPEMNSVDFLFEVTDDDRRLLFLNERGKKKLMDGNRVVFKDGSDPSFFSGKIIECSWVAEEQEWVCMRGRPDKSTPNEFNTYKKVMRSIRDNITQDILLGEIQEIICLPMYADRIRNDSKAHQHTNSARQKNNKNESHRIEDSIRLVKDDFCEVVPPIYCDHMKSSVIRVYVTFLLLFASLNCFHGDVAEKKKNKFREREATDDSLGYPNIDEDALLNTQCPRNLELRWQTEVSSSIYATPLIADINSDGKLDIVVPSFVHYLEVLEGSDGDKMPGWPAFHQSTVHASPLLYDIDKDGVREIALATYNGEVLFFRVSGYLMADKLEVPRRRVLKNWHVNLKPDPMDRSHPDVHDDLLIKEAANTNSMPQTNGVTPVLNHSASIGTTGNTTEANHSATIGMKGSVLELNSSATAFYGSNQESGVKINGSMIESNIRLSTRTGNASVNTEPTETSNARNGTSAGRRLLDDSTSKGSQGDSGSNNSKSEDVPVSTVENDEALEDIADSSFDLFRESDELGDEYNYDYDDYVDDTMWGDEEFTEVKHEKEEDYVNVDAHILCTPVIADIDNDGVSEMVVAVSYFYDHEYYDNPEHMKELGGIDITKYVAGAIVVFNLDSKQVKWTTQLDLSTDTGNFRAHIYSSPTVVDLDGDGKLDILVGTSYGMFYVLDHLGKTREKFPLEMAEIQGGVVAADINDDGKIELLTADTHGNVAAWTTRGEEIWEKHLKSLVPQGPTVGDIDGDGHTEVVIPTLSGNIYVLSGKDGSFVRPYPYRTHGKVMNQVLLIDLNKYGEKKKGLTLVTTSFDGYLYLIDGPSSCADVVDIGETSYSMVLADNVDGGDDLDLIVTTMNGNVFCFSTPSPHHPLKSWRSSNQGRNVVANRFNREGIYVTHPSRAFRDEEGKNFWVDLEIVDSHRFPSGLQAPYNVTTTLLVPGNYQGERRIIQNQIIDKPGRHQIKLPTVNVRTSGTVLVEMVDKNGLYFSDDFSLTFHMHYYKLLKWLLVLPMLGMFGVLVILRPQEPVPLPSFSRNTDL 1586
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 10039588 10050779 + Conep13aG0141800.1 Cone13ag1383 451770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag1383 1586 SUPERFAMILY Nucleic acid-binding proteins 559 672 IPR012340 -
Cone13ag1383 1586 Gene3D - 1105 1417 IPR015943 GO:0005515(InterPro)
Cone13ag1383 1586 MobiDBLite consensus disorder prediction 35 59 - -
Cone13ag1383 1586 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 186 255 IPR000387 GO:0016311(InterPro)
Cone13ag1383 1586 ProSiteProfiles Dual specificity protein phosphatase domain profile. 111 267 IPR020422 GO:0006470(InterPro)
Cone13ag1383 1586 SMART dsp_5 118 263 IPR020422 GO:0006470(InterPro)
Cone13ag1383 1586 ProSitePatterns Tyrosine specific protein phosphatases active site. 208 218 IPR016130 GO:0016311(InterPro)
Cone13ag1383 1586 CDD RNA_5'-triphosphatase 92 258 - -
Cone13ag1383 1586 MobiDBLite consensus disorder prediction 993 1045 - -
Cone13ag1383 1586 PANTHER - 745 1573 IPR045232 -
Cone13ag1383 1586 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 318 557 - -
Cone13ag1383 1586 CDD Adenylation_mRNA_capping 338 557 IPR001339 GO:0004484(InterPro)|GO:0005524(InterPro)|GO:0006370(InterPro)
Cone13ag1383 1586 FunFam mRNA capping enzyme, putative 317 554 - -
Cone13ag1383 1586 Gene3D DNA ligase/mRNA capping enzyme 317 556 - -
Cone13ag1383 1586 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 88 278 IPR029021 -
Cone13ag1383 1586 Pfam FG-GAP-like repeat 1201 1257 IPR013517 -
Cone13ag1383 1586 Pfam mRNA capping enzyme, C-terminal domain 595 655 IPR013846 -
Cone13ag1383 1586 Gene3D Protein tyrosine phosphatase superfamily 85 297 IPR029021 -
Cone13ag1383 1586 SUPERFAMILY Integrin alpha N-terminal domain 774 1342 IPR028994 -
Cone13ag1383 1586 MobiDBLite consensus disorder prediction 675 695 - -
Cone13ag1383 1586 MobiDBLite consensus disorder prediction 993 1048 - -
Cone13ag1383 1586 Pfam Dual specificity phosphatase, catalytic domain 141 261 IPR000340 GO:0016311(InterPro)
Cone13ag1383 1586 Pfam mRNA capping enzyme, catalytic domain 358 556 IPR001339 GO:0004484(InterPro)|GO:0005524(InterPro)|GO:0006370(InterPro)
Cone13ag1383 1586 FunFam mRNA capping enzyme family protein 85 299 - -
Cone13ag1383 1586 Gene3D - 557 649 IPR012340 -
Cone13ag1383 1586 FunFam mRNA capping enzyme family protein 555 664 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag1374 Cone-Chr19:9086564 Cone13ag1383 Cone-Chr13:10039588 0 transposed
Cone13ag1383 Cone-Chr13:10039588 Cone19ag1373 Cone-Chr19:9078101 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag1383 - - - 0.0