Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag1418 ATGGAAATGGACATGGACGAAACCTCAACAGGCAAAGAATGTGCGTCCAAAGGTAATGAGGAGCAAGCAAACCCGATCGTGGTGATATTAGTTGGTGCACCAGGGAGTGGAAAGTCCACTTTTTGTGATAACGTCATGCGCTCCTCTTCCCGCCCTTGGGTGCGAATATGCCAGGACACTATTGGAAATGGTAAGGCTGGAACTAAAGCTCAGTGCCTGAAGAGTGCAGCCAATGCATTGAAAGATGGGAAAAGTGTTTTTATCGATAGGTGCAACTTAGACAGAGAACAACGTTCCGATTTTGTGAAGCTTGGTGGATCCCAAGTAGATGTGCATGCTGTAGTACTTGATCTTCCTGCAAAGCTTTGTATATCCAGATCCGTTAAACGAACTGGTCATGAAGGAAACTTACAAGGTGGAATGGCAGCAGCAGTTGTGAACAGGATGCTGCAAAAGAAAGAGTTGCCTGAACTAAATGAAGGCTTGGCTCGGATCACTTACTGCCATAATGACACTGATGTTCAATCTGCTTTTGATACTTACACTGCACTTGGACCTCAAGATACTCTTCCACGTGGTTGTATTGGACGGAAGATTCCTCCGGATTCTAAAAGGCAACTTAGCATTATGAAGTTCTTGATGAAAGCAGATCATCCTGCTAATACAGCATCTAATGTTGATATTCTTAAGGATTCTGCTACTCGCCAAACTGCTGAAAAAAATGTTGAAAAATCAGAGACTGCTTCTTCAGTCCCATTAACTAACAAGGCCGTACAGAAAGGCGAAGGGCTAGTGTTGGACTCTTTAGGTGGGGATGTTTCTCTGAATGATACTCCCATTCTTGCATTTCCTTCTATATCAACAGCAGACTTCCAATTCAATCTTGAAAAAGCATCTGAAGTTATTGTTGAGGAAGTTGAGAAATTTGTGAGTAAGCTTGGAAATGCTAGGCTTGTATTGGTAGACTTGAGTCATGGGTCAAATATCTTGTCTTTGGTCAAGGCTAAAGCTGCTCAGAGAAACATTGACTCCAACAGGTTCTCTACATTTATTGGAGACATAACTCGTCTTTGTTCTGAAGGTGGCTTGCGCTGCAATGTAATAGCCAATGCTGCTAACTGGCGACTCAAACCAGGAGGTGGAGGTGTGAATGCTGCAATTTATAGTGCTGCTGGTCCTTCCCTAGAAGGGGCAACCAAAGAACAAGCTAACTTCCTTCTCCCAGGTAATGTTGTGGTAGTTCCTCTGCCTTCAACTTCTCCCCTGTTTAGCAGGGAAGGAGTAACCCATATCATACATGTTCTTGGACCGAATATGAACCCACAAAGACCGGATTGTCTCAATAACGACTACAGTAAAGGTTGCCAACTACTCCGCTCTGCTTACTCTTCGTTATTCAATGGTTTTGCTTCTATAGTGGAGGGTCGGTCTAAAGAAAGCAGTGAAAACTTAGCCTCAAAACCTGTAACCCAGTCGCCAAAACACTCTCAAGAAGGCCCCACCTATCCAGTTACAAGTAGTAATCATAAGTTCAATAGAGATGTCCAAGATTCTGGAAGGAGCAAGAAATGTAAGGTATCTCAGGATAAACCTTCCAGTGATTCTACAGCTGAAATGGTAGACACTGAAAAGATTGTCAAAATCAAGATTAGGACATGGGCACCATGGTTTCATGCTCTTTACGACATTGCCATGCATCCAGAGAAACATAAGGATACTGTACTTGAAATATCAAACGATGTCGTCGTATTAAATGATCTATATCCGAAGGCACAGAAGCATCTTCTAGTATTAGCTCGTTGTGAAGACCTTGAATGCTTGGCAGATGTAGGAGCCATCCATGAAGCAATTGCACCTACATGTTATTAG 1869 42.96 MEMDMDETSTGKECASKGNEEQANPIVVILVGAPGSGKSTFCDNVMRSSSRPWVRICQDTIGNGKAGTKAQCLKSAANALKDGKSVFIDRCNLDREQRSDFVKLGGSQVDVHAVVLDLPAKLCISRSVKRTGHEGNLQGGMAAAVVNRMLQKKELPELNEGLARITYCHNDTDVQSAFDTYTALGPQDTLPRGCIGRKIPPDSKRQLSIMKFLMKADHPANTASNVDILKDSATRQTAEKNVEKSETASSVPLTNKAVQKGEGLVLDSLGGDVSLNDTPILAFPSISTADFQFNLEKASEVIVEEVEKFVSKLGNARLVLVDLSHGSNILSLVKAKAAQRNIDSNRFSTFIGDITRLCSEGGLRCNVIANAANWRLKPGGGGVNAAIYSAAGPSLEGATKEQANFLLPGNVVVVPLPSTSPLFSREGVTHIIHVLGPNMNPQRPDCLNNDYSKGCQLLRSAYSSLFNGFASIVEGRSKESSENLASKPVTQSPKHSQEGPTYPVTSSNHKFNRDVQDSGRSKKCKVSQDKPSSDSTAEMVDTEKIVKIKIRTWAPWFHALYDIAMHPEKHKDTVLEISNDVVVLNDLYPKAQKHLLVLARCEDLECLADVGAIHEAIAPTCY 622
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 10200897 10204257 - Conep13aG0145300.1 Cone13ag1418 451805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag1418 622 SUPERFAMILY HIT-like 541 609 IPR036265 -
Cone13ag1418 622 MobiDBLite consensus disorder prediction 480 512 - -
Cone13ag1418 622 FunFam Transcription factor bHLH140 327 474 - -
Cone13ag1418 622 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 22 171 IPR027417 -
Cone13ag1418 622 Gene3D Leucine Aminopeptidase, subunit E, domain 1 322 473 IPR043472 -
Cone13ag1418 622 FunFam Transcription factor bHLH140 13 183 - -
Cone13ag1418 622 SMART YBR022w_8 346 485 IPR002589 -
Cone13ag1418 622 Gene3D - 5 183 IPR027417 -
Cone13ag1418 622 SUPERFAMILY Macro domain-like 328 466 IPR043472 -
Cone13ag1418 622 PANTHER APRATAXIN-RELATED 88 612 - GO:0000012(PANTHER)|GO:0003697(PANTHER)|GO:0003725(PANTHER)|GO:0005634(PANTHER)|GO:0030983(PANTHER)|GO:0033699(PANTHER)|GO:1990165(PANTHER)
Cone13ag1418 622 Pfam Macro domain 370 450 IPR002589 -
Cone13ag1418 622 ProSiteProfiles Macro domain profile. 334 569 IPR002589 -
Cone13ag1418 622 MobiDBLite consensus disorder prediction 480 538 - -
Cone13ag1418 622 Gene3D - 555 618 IPR036265 -
Cone13ag1418 622 Pfam AAA domain 27 155 - -
Cone13ag1418 622 MobiDBLite consensus disorder prediction 513 529 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag1418 Cone-Chr13:10200897 Cone19ag1413 Cone-Chr19:9242581 1.13E-245 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag1418 K10863 - mdm:103425917 759.985