Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag1431 ATGGATGACGAACTACGGCTCGATTCCAGTATTGATTCCTATTGTAGCGGTACGACAGCCGTTACTGCAGTTAAACAGGATGAACACTTAAGAATTGCTAACTTGGGCGATTCTCGAGCTGTTCTTTGTACCAGAGGAGACAGAAATCAACTTCTTCCTGTCCAACTCACAGTTGACTTGAAACCTGATGTTGCATATGAAGCTGAAAGGATAAAGTGTTGTCAAGGGAGAATCTTGGCAGATACTGGAGAGCCTGATGTTTACAGAATATGGATGCCAGATGAAGATTATTCAGGTCTTGCTATGGCTAGAGCGTTTGGTGATTTTTGCCTCAAAGATCACGGCCTTATCGCTACTCCTCAAGTATGGGACGTGCTTACAAACGCAGAGGTAATTAAAACAGTAGCATGTGCTGAGACGCAACCTGTGGCAACTAAGCTTGTAGCAATGCGTGCTGGCAAGACATGGAAGCGGAAATATCCCAGGTCGACGATCGATGATTGCAACGGTTTTTTGCTTGTTCCTCAAGAGCCAAACAAATCCGACGTCAGGAAATTTGGTAAGAGTGGTTTCGTAGCGATTCATATGCAATAG 594 44.44 MDDELRLDSSIDSYCSGTTAVTAVKQDEHLRIANLGDSRAVLCTRGDRNQLLPVQLTVDLKPDVAYEAERIKCCQGRILADTGEPDVYRIWMPDEDYSGLAMARAFGDFCLKDHGLIATPQVWDVLTNAEVIKTVACAETQPVATKLVAMRAGKTWKRKYPRSTIDDCNGFLLVPQEPNKSDVRKFGKSGFVAIHMQ 197
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 10263933 10264813 - Conep13aG0146700.1 Cone13ag1431 451818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag1431 197 Pfam Protein phosphatase 2C 4 122 IPR001932 -
Cone13ag1431 197 ProSiteProfiles PPM-type phosphatase domain profile. 1 197 IPR001932 -
Cone13ag1431 197 CDD PP2Cc 1 155 IPR001932 -
Cone13ag1431 197 Gene3D - 1 172 IPR036457 -
Cone13ag1431 197 PANTHER PROTEIN PHOSPHATASE 1 125 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cone13ag1431 197 SUPERFAMILY PP2C-like 9 148 IPR036457 -
Cone13ag1431 197 SMART PP2C_4 4 173 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag1431 Cone-Chr13:10263933 Cone1ag1702 Cone-Chr1:57974327 3.83E-56 dispersed
Cone13ag1431 Cone-Chr13:10263933 Cone19ag1428 Cone-Chr19:9298017 9.25E-103 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag1431 - - - 0.0