Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag1446 ATGAGTTGCAGCGAGAACAAGAGAGGAAGAGAGGAGACAGAGCCTGATGAGTTGCCTCCTCCTATGTCTCCTGCGTTAGAACCAAAACCTGTTACTCAGAATGGATCCATCACGTCCTCCCCACCATTAACAATCGATGAAAATCGTCTGGTTGACCCAAAATTGTTGTTTATTGGGTATCGGGATAAAATTGTTGCAATCAAAGTTCTCCATCGTGGAAGTAAACCTGAAGAAAGAGCTTCACTTGAAAATCAGTTTGCCCGAGAAGTCATCATGATGTCTCGAGTGACACATGAGAATCTTGTCAAGTTTATTGGCACTTGTAAAGATCCCTTAATGGTGATAGTGACAGAGCTATTGCCAGGGATGTCTCTTCGGAAGTACTTAGGTAGTATTCGCCCAAACCAACTAGACCTTCATGTAGCTATTAACTATGCGCTGGATATTGCTCGTGCTATGGATTGTCTACATGCCAATGGCATAATACATAGAGATCTGAAACCTGGTACCATATGGCTACTTCAGCTGACTATTGCTTATGTTCTGGCTGTTTCTTTAAGCTAA 564 42.55 MSCSENKRGREETEPDELPPPMSPALEPKPVTQNGSITSSPPLTIDENRLVDPKLLFIGYRDKIVAIKVLHRGSKPEERASLENQFAREVIMMSRVTHENLVKFIGTCKDPLMVIVTELLPGMSLRKYLGSIRPNQLDLHVAINYALDIARAMDCLHANGIIHRDLKPGTIWLLQLTIAYVLAVSLS 187
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 10362427 10363201 + Conep13aG0148300.1 Cone13ag1446 451833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag1446 187 MobiDBLite consensus disorder prediction 1 44 - -
Cone13ag1446 187 SUPERFAMILY Protein kinase-like (PK-like) 61 171 IPR011009 -
Cone13ag1446 187 PANTHER SERINE-THREONINE PROTEIN KINASE 60 173 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cone13ag1446 187 Pfam Protein tyrosine and serine/threonine kinase 63 167 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone13ag1446 187 ProSiteProfiles Protein kinase domain profile. 1 187 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone13ag1446 187 MobiDBLite consensus disorder prediction 29 44 - -
Cone13ag1446 187 Gene3D Transferase(Phosphotransferase) domain 1 59 182 - -
Cone13ag1446 187 MobiDBLite consensus disorder prediction 1 17 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag1446 Cone-Chr13:10362427 Cone18ag1380 Cone-Chr18:9463826 1.50E-47 dispersed
Cone10ag0440 Cone-Chr10:2045302 Cone13ag1446 Cone-Chr13:10362427 2.23E-78 wgd
Cone13ag1446 Cone-Chr13:10362427 Cone19ag1445 Cone-Chr19:9410125 1.88E-103 wgd
Cone13ag1446 Cone-Chr13:10362427 Cone3ag0473 Cone-Chr3:2302328 3.51E-81 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82058 PF00076 RRM_1 3.10E-08 CL0221 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag1446 - - - 0.0