Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0002 ATGGCTTTGCTAAGCCCACGATTGCAAAGATTCCGCTTAGCCAAGCTTAATTCCTCCCCCTCCCACTTTTCCATGACCAGCAGCAAAAACAGCCTCACAGTGATGAGAAGAGCGGAAAGCAGCCGCTGCCTGGCTATAGCCATTGATGCACCATCTTCTTTCAAGGATGTTTCAGGCATAAGGTGGGGTTCTACGAGTCTGCAAGGTTTACGTGAAGAAATGGAGGACGCTGTTGTTGTTCGTCCTGACGGTCTGGATGGCTTCTTGTTTGCTTCAGTTTTTGATGGGCATGGTGGCTTTTCCTCAGTCAACTTCCTCAGGGAGGAGCTGTACAAAGAGTGCGTAGATGCTTTACAAGGTGGGTTACTGTTAAATGGAAAAGATCTAAAGACCATTACAGAGTCGCTAAAGAAGGCTTTTGAAAAGGCGGACAGAAGATTGCTAAATTGGCTCGAATCGAATGGGGAGGAGGATGAATCTGGTTCAACAGCAACTGTCATGTTCGTTGCAAGCAATATCTTGTTTGTTTCACATGTTGGTGACTCCTGCGTGGTCCTATCTAGGTCTAGAGGGCCACAAGTGTTGACTAATCCTCATCGGCCTTATGGAAGCAGCAAGGTCTCTCTAGAGGAAATCAAAAGAATTCGAGAAGCAGGGGGATGGATTTCAAATGGAAGGATTTGTGGAGACATCTCTGTATCTCGTGCTTTTGGCGACACACGTTTTAAGACAAAAAAGAATGAGATGCTGAAGAAGGGTGTTGGGGAAGGAAGATGGTCTGAAAAATTTGTTTCTCGTGTACGATTCAATGAAGACTTGGTCATTGCATCACCTGATATCTACCAGGTTACTCTTGGATCAGATACAGAATTCATTCTGTTAGCATCTGATGGCTTGTGGGATTACATGAACAGTGCAGATGCGGTTAAGTTTGTTCGAGATCACCTTAGAAATCATGGTGATGTTCAGCAAGCTTGCGAAGCACTTGCAGGAGCAGCGCTGGATCGGCGTTCACAAGATAATATAAGCATTGTTGTAGTCGATCTGGGGCGAACAGACTGGCAGAGCTTGCCAATCCAGGAACAGAGTTTCGTATATGAACTGGGTCAAGCTTTTGCTACTATCAGTATTGTCTTCCTCGGAATCTGGATGTCGCAGTTGTCCTTATGA 1170 45.56 MALLSPRLQRFRLAKLNSSPSHFSMTSSKNSLTVMRRAESSRCLAIAIDAPSSFKDVSGIRWGSTSLQGLREEMEDAVVVRPDGLDGFLFASVFDGHGGFSSVNFLREELYKECVDALQGGLLLNGKDLKTITESLKKAFEKADRRLLNWLESNGEEDESGSTATVMFVASNILFVSHVGDSCVVLSRSRGPQVLTNPHRPYGSSKVSLEEIKRIREAGGWISNGRICGDISVSRAFGDTRFKTKKNEMLKKGVGEGRWSEKFVSRVRFNEDLVIASPDIYQVTLGSDTEFILLASDGLWDYMNSADAVKFVRDHLRNHGDVQQACEALAGAALDRRSQDNISIVVVDLGRTDWQSLPIQEQSFVYELGQAFATISIVFLGIWMSQLSL 389
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 28189 30890 - Conep14aG0000300.1 Cone14ag0002 451851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0002 389 PANTHER PROTEIN PHOSPHATASE 2C 50 349 IPR015655 GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0006470(PANTHER)
Cone14ag0002 389 CDD PP2Cc 60 349 IPR001932 -
Cone14ag0002 389 SMART PP2C_4 51 347 IPR001932 -
Cone14ag0002 389 SUPERFAMILY PP2C-like 58 350 IPR036457 -
Cone14ag0002 389 ProSitePatterns PPM-type phosphatase domain signature. 90 98 IPR000222 GO:0043169(InterPro)
Cone14ag0002 389 Gene3D - 60 355 IPR036457 -
Cone14ag0002 389 ProSiteProfiles PPM-type phosphatase domain profile. 61 349 IPR001932 -
Cone14ag0002 389 Pfam Protein phosphatase 2C 63 342 IPR001932 -
Cone14ag0002 389 FunFam Protein phosphatase 2C 57 60 356 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0002 Cone-Chr14:28189 Cone4ag1725 Cone-Chr4:12767565 2.54E-31 dispersed
Cone14ag0002 Cone-Chr14:28189 Cone12ag1295 Cone-Chr12:9857607 2.69E-31 transposed
Cone14ag0002 Cone-Chr14:28189 Cone4ag1446 Cone-Chr4:11479275 2.39E-32 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0002 K04457 - cit:102612028 564.688